RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 PLVAPQ9BX97 442 aa6.42□□□□□ -1.38
SHQ1-205ENST00000468371 AGXT2Q9BYV1 514 aa6.42□□□□□ -1.38
SHQ1-205ENST00000468371 ABHD10Q9NUJ1 306 aa6.42□□□□□ -1.38
SHQ1-205ENST00000468371 FRMD4BQ9Y2L6 1034 aa6.42□□□□□ -1.38
SHQ1-205ENST00000468371 GRIN2DO15399 1336 aa6.42□□□□□ -1.38
SHQ1-205ENST00000468371 IGSF9BQ9UPX0 1349 aa6.42□□□□□ -1.38
SHQ1-205ENST00000468371 ESYT3A0FGR9 886 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 BICDL2A1A5D9 508 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 LINC01553A4QN01 128 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 H7C4K7 107 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 HAS3O00219 553 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 PER2O15055 1255 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 HIP1RO75146 1068 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 GLUD1P00367 558 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 ATP1A1P05023 1023 aaKnown RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 P4HA1P13674 534 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 AKAP5P24588 427 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 RPL13P26373 211 aaKnown RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 SSR1P43307 286 aaKnown RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 TSPY1Q01534 308 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CREMQ03060 361 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 GRB10Q13322 594 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CCDC149Q6ZUS6 474 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 VPS36Q86VN1 386 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 RDH13Q8NBN7 331 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CASP10Q92851 521 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 TBC1D31Q96DN5 1066 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 DDX27Q96GQ7 796 aaKnown RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 NOX5Q96PH1 765 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 GSDMAQ96QA5 445 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 TUBGCP2Q9BSJ2 902 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 KAT6AQ92794 2004 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 TMEM110-MUSTN1A8MSY1 372 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 C22orf31O95567 290 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CHRNA1P02708 482 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 ALADP13716 330 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 ITGB8P26012 769 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 ARHGAP25P42331 645 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 NAMPTP43490 491 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 MYO1EQ12965 1108 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CUL4BQ13620 913 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 USP41Q3LFD5 358 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CFAP221Q4G0U5 840 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 PDXDC1Q6P996 788 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 MMS22LQ6ZRQ5 1243 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 ADAT2Q7Z6V5 191 aaKnown RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 UBE2Q1Q7Z7E8 422 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CATSPER3Q86XQ3 398 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 ECHDC2Q86YB7 292 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CCDC117Q8IWD4 279 aaPredicted RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 SLC43A3Q8NBI5 491 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CTNNBL1Q8WYA6 563 aaPredicted RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 MRPL38Q96DV4 380 aaKnown RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 TSGA10Q9BZW7 698 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 AGO3Q9H9G7 860 aaKnown RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 EPB41L5Q9HCM4 733 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 SLC39A2Q9NP94 309 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 SRPRBQ9Y5M8 271 aaKnown RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CNTNAP2Q9UHC6 1331 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CYP3A7-CYP3A51PA0A087WV96 503 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CASTOR2A6NHX0 329 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 EML1O00423 815 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 NEBLO76041 1014 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CYP3A7P24462 503 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 ALDH1A3P47895 512 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 SCNN1GP51170 649 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 TNNC1P63316 161 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 TAP1Q03518 808 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 EHHADHQ08426 723 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 FUT2Q10981 343 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 SEMA3FQ13275 785 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 BEND6Q5SZJ8 279 aaPredicted RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 RARS2Q5T160 578 aaKnown RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 NELFCDQ8IXH7 590 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 HASPINQ8TF76 798 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 ANKRD36BP1Q96IX9 119 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CDK5RAP2Q96SN8 1893 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 KRT12Q99456 494 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 TACO1Q9BSH4 297 aaKnown RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 GPRC5CQ9NQ84 441 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 SMARCAL1Q9NZC9 954 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 CD207Q9UJ71 328 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 SF3B1O75533 1304 aaKnown RBP eCLIP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 TTC26A0AVF1 554 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 GOLGA8KD6RF30 607 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 SOX1O00570 391 aaPredicted RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 HUS1O60921 280 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 ZRANB2O95218 330 aaKnown RBP eCLIP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 LDHAP00338 332 aaKnown RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 MYZAPP0CAP1 466 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 MLH1P40692 756 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 RARRES1P49788 294 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 ACTN3Q08043 901 aaPredicted RBP6.41□□□□□ -1.38
SHQ1-205ENST00000468371 NNTQ13423 1086 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 KRT71Q3SY84 523 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 GLRA4Q5JXX5 417 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 HAUS6Q7Z4H7 955 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 SH2D3CQ8N5H7 860 aa6.41□□□□□ -1.38
SHQ1-205ENST00000468371 TRIM58Q8NG06 486 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms