RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 PIK3CAP42336 1068 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 APBA1Q02410 837 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 CETN1Q12798 172 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 NAB2Q15742 525 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 EPC2Q52LR7 807 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 PSRC1Q6PGN9 363 aaPredicted RBP7.39□□□□□ -1.23
SCAF4-204ENST00000467731 GBP6Q6ZN66 633 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 NPAS4Q8IUM7 802 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 ABI1Q8IZP0 508 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 SEMA4DQ92854 862 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 TOP1MTQ969P6 601 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 ELMO3Q96BJ8 720 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 DPP3Q9NY33 737 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 CXXC1Q9P0U4 656 aaPredicted RBP7.39□□□□□ -1.23
SCAF4-204ENST00000467731 FEZ2Q9UHY8 353 aaPredicted RBP7.39□□□□□ -1.23
SCAF4-204ENST00000467731 UBQLN1Q9UMX0 589 aaKnown RBP7.39□□□□□ -1.23
SCAF4-204ENST00000467731 SIK3Q9Y2K2 1263 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 COQ4Q9Y3A0 265 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 SZT2Q5T011 3432 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 COL4A6Q14031 1691 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 A0A1W2PQC6 194 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 INPPL1O15357 1258 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 PHACTR2O75167 634 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 HLA-DRAP01903 254 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 AMHP03971 560 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 KRT19P08727 400 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 PON1P27169 355 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 NOP2P46087 812 aaKnown RBP7.39□□□□□ -1.23
SCAF4-204ENST00000467731 KCNJ6P48051 423 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 GRIK3Q13003 919 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 NCOA4Q13772 614 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 FAM117BQ6P1L5 589 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 TRIM65Q6PJ69 517 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 VSTM4Q8IW00 320 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 BEST2Q8NFU1 509 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 LMO3Q8TAP4 145 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 CXorf38Q8TB03 319 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 PI4K2AQ9BTU6 479 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 FAM207AQ9NSI2 230 aaPredicted RBP7.39□□□□□ -1.23
SCAF4-204ENST00000467731 RAB20Q9NX57 234 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 CACNG4Q9UBN1 327 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 SIX4Q9UIU6 781 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 XPOTO43592 962 aaKnown RBP7.38□□□□□ -1.23
SCAF4-204ENST00000467731 POLR2BP30876 1174 aaKnown RBP7.38□□□□□ -1.23
SCAF4-204ENST00000467731 MAGEA10P43363 369 aaPredicted RBP7.38□□□□□ -1.23
SCAF4-204ENST00000467731 NOMO2Q5JPE7 1267 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 SPECC1LQ69YQ0 1117 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 PCMTD1Q96MG8 357 aaPredicted RBP7.38□□□□□ -1.23
SCAF4-204ENST00000467731 CASD1Q96PB1 797 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 TSPAN18Q96SJ8 248 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 SLC38A7Q9NVC3 462 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 TBC1D13Q9NVG8 400 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 ITGA11Q9UKX5 1188 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 CASTOR2A6NHX0 329 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 PPEF2O14830 753 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 EPHB6O15197 1021 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 HOXA2O43364 376 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 DGKIO75912 1065 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 TRIM21P19474 475 aaKnown RBP7.38□□□□□ -1.23
SCAF4-204ENST00000467731 CYP3A5P20815 502 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 MYL6P60660 151 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 LRMPQ12912 555 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 TRPC3Q13507 836 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 SPOPLQ6IQ16 392 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 TMC6Q7Z403 805 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 ZNF280BQ86YH2 543 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 SPC24Q8NBT2 197 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 EHBP1Q8NDI1 1231 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 URGCPQ8TCY9 931 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 PAAF1Q9BRP4 392 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 LSM14BQ9BX40 385 aaKnown RBP7.38□□□□□ -1.23
SCAF4-204ENST00000467731 INTS2Q9H0H0 1204 aaKnown RBP7.38□□□□□ -1.23
SCAF4-204ENST00000467731 HCSTQ9UBK5 93 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 GBF1Q92538 1859 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 TBKBP1A7MCY6 615 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 B4GALT3O60512 393 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 NOL4O94818 638 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 DDHD2O94830 711 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 CDC25BP30305 580 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 CLCNKBP51801 687 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 NOP14P78316 857 aaKnown RBP7.38□□□□□ -1.23
SCAF4-204ENST00000467731 RNASELQ05823 741 aaKnown RBP7.38□□□□□ -1.23
SCAF4-204ENST00000467731 PAN2Q504Q3 1202 aaKnown RBP7.38□□□□□ -1.23
SCAF4-204ENST00000467731 C9orf57Q5W0N0 161 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 PHLDB3Q6NSJ2 640 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 DPY19L2P1Q6NXN4 242 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 DRC7Q8IY82 874 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 MNS1Q8NEH6 495 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 HERVK_113Q902F9 699 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 RABGGTAQ92696 567 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 IMPG2Q9BZV3 1241 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 XYLT2Q9H1B5 865 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 SIX2Q9NPC8 291 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 KANSL3Q9P2N6 904 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 APEX2Q9UBZ4 518 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 AGAP1Q9UPQ3 857 aa7.38□□□□□ -1.23
SCAF4-204ENST00000467731 KIAA1671Q9BY89 1806 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 ITIH6Q6UXX5 1313 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 ANO9A1A5B4 782 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 ASS1P00966 412 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms