RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 RTN2O75298 545 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 PALMO75781 387 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 MTA2O94776 668 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 TNNC2P02585 160 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 RPLP2P05387 115 aaKnown RBP10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 MYL3P08590 195 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 DARSP14868 501 aaKnown RBP10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 AXLP30530 894 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 FLT3LGP49771 235 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 PDE6CP51160 858 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 NAP1L1P55209 391 aaKnown RBP10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 NOP14P78316 857 aaKnown RBP10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 FMO1Q01740 532 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 TMEM132AQ24JP5 1023 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 SEZ6Q53EL9 994 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 CYP4F22Q6NT55 531 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 PPP1R2P3Q6NXS1 205 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 TRIM72Q6ZMU5 477 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 ZNF572Q7Z3I7 529 aaPredicted RBP10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 NOP9Q86U38 636 aaKnown RBP10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 SLC47A2Q86VL8 602 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 RHOT2Q8IXI1 618 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 THNSL1Q8IYQ7 743 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 SYCE1Q8N0S2 351 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 GPR161Q8N6U8 529 aaKnown RBP10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 LRRC57Q8N9N7 239 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 TRPV1Q8NER1 839 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 TPCN2Q8NHX9 752 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 SLC20A1Q8WUM9 679 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 CTNNBL1Q8WYA6 563 aaPredicted RBP10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 ANKRD36BP1Q96IX9 119 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 ZNF668Q96K58 619 aaPredicted RBP10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 PCDHB18PQ96TA0 734 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 ADPGKQ9BRR6 497 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 PI4K2AQ9BTU6 479 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 PRR14Q9BWN1 585 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 TLR10Q9BXR5 811 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 FAM124BQ9H5Z6 455 aaPredicted RBP10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 VRTNQ9H8Y1 702 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 PLEKHA5Q9HAU0 1116 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 NUB1Q9Y5A7 615 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 MCM3APO60318 1980 aa10.23□□□□□ -0.77
APOBEC1-202ENST00000467171 PLXNA1Q9UIW2 1896 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 SEPT4O43236 478 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 ERLIN2O94905 339 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 STAU1O95793 577 aaKnown RBP10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 CST3P01034 146 aaPredicted RBP10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 TUBBP07437 444 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 TMEM191BP0C7N4 346 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 CYP2C9P11712 490 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 KRT5P13647 590 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 HOXA11P31270 313 aaPredicted RBP10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 ATICP31939 592 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 USP8P40818 1118 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 GRM5P41594 1212 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 ZNF132P52740 706 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 GPC5P78333 572 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 TRPC3Q13507 836 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 ELF2Q15723 593 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 ERCC6LQ2NKX8 1250 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 MEI1Q5TIA1 1274 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 TAF2Q6P1X5 1199 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 Q6ZNB5 142 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 PALB2Q86YC2 1186 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 EFCAB13Q8IY85 973 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 CEP120Q8N960 986 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 TRIB2Q92519 343 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 LENG1Q96BZ8 264 aaPredicted RBP10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 SCLT1Q96NL6 688 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 TSPAN18Q96SJ8 248 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 OSBPL9Q96SU4 736 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 MTG1Q9BT17 334 aaPredicted RBP10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 MTMR12Q9C0I1 747 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 NIF3L1Q9GZT8 377 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 XYLT2Q9H1B5 865 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 SPC25Q9HBM1 224 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 TAS2R14Q9NYV8 317 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 HDAC6Q9UBN7 1215 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 DERAQ9Y315 318 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 C2CD2Q9Y426 696 aa10.22□□□□□ -0.77
APOBEC1-202ENST00000467171 LACTBL1A8MY62 500 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 MEFVO15553 781 aaPredicted RBP10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 FTLP02792 175 aaPredicted RBP10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 CYP1A1P04798 512 aaPredicted RBP10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 CYP1A2P05177 515 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 MMEP08473 750 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 CXCL8P10145 99 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 EIF4BP23588 611 aaKnown RBP10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 DNAJB2P25686 324 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 HOXD10P28358 340 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 NOP2P46087 812 aaKnown RBP10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 CRYBB1P53674 252 aaPredicted RBP10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 MYL6P60660 151 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 YWHAEP62258 255 aaKnown RBP10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 TFAMQ00059 246 aaKnown RBP10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 BEX3Q00994 111 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 SP3Q02447 781 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 PRKCZQ05513 592 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 HIC1Q14526 733 aa10.21□□□□□ -0.77
APOBEC1-202ENST00000467171 NAA30Q147X3 362 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms