RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 CHMP4CQ96CF2 233 aa5.94□□□□□ -1.46
PRPF40A-205ENST00000467114 TEKT5Q96M29 485 aa5.94□□□□□ -1.46
PRPF40A-205ENST00000467114 SLC2A13Q96QE2 648 aa5.94□□□□□ -1.46
PRPF40A-205ENST00000467114 SENP6Q9GZR1 1112 aaPredicted RBP5.94□□□□□ -1.46
PRPF40A-205ENST00000467114 DMRT3Q9NQL9 472 aa5.94□□□□□ -1.46
PRPF40A-205ENST00000467114 TBCCD1Q9NVR7 557 aa5.94□□□□□ -1.46
PRPF40A-205ENST00000467114 SLC23A1Q9UHI7 598 aa5.94□□□□□ -1.46
PRPF40A-205ENST00000467114 ARHGEF17Q96PE2 2063 aaPredicted RBP5.94□□□□□ -1.46
PRPF40A-205ENST00000467114 ENDOD1O94919 500 aa5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 PRSS23O95084 383 aa5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 GPANK1O95872 356 aa5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 IGLV2-14P01704 120 aa5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 EDNRBP24530 442 aa5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 SLC5A3P53794 718 aa5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 MALLQ13021 153 aa5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 ZNF529Q6P280 563 aa5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 OR2I1PQ8NGU4 316 aa5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 PDLIM2Q96JY6 352 aa5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 SPATA5L1Q9BVQ7 753 aa5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 RTFDC1Q9BY42 306 aaPredicted RBP5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 SEMA4GQ9NTN9 838 aa5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 FBXO34Q9NWN3 711 aa5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 AJAP1Q9UKB5 411 aaPredicted RBP5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 AATKQ6ZMQ8 1374 aa5.93□□□□□ -1.46
PRPF40A-205ENST00000467114 KLHL33A6NCF5 533 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 MYADML2A6NDP7 307 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 MGST3O14880 152 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 TEX33O43247 280 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 CDK4P11802 303 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 CKBP12277 381 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 FPR1P21462 350 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 SLC6A2P23975 617 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 HSD11B2P80365 405 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 MGAT2Q10469 447 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 SEPT2Q15019 361 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 CPA6Q8N4T0 437 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 CAMKK2Q96RR4 588 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 SMAD5Q99717 465 aaKnown RBP5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 LDAHQ9H6V9 325 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 CASS4Q9NQ75 786 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 TMEM140Q9NV12 185 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 MKS1Q9NXB0 559 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 USP25Q9UHP3 1055 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 SERPINB13Q9UIV8 391 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 IPPQ9Y573 584 aa5.92□□□□□ -1.46
PRPF40A-205ENST00000467114 AKAP10O43572 662 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 NDUFS2O75306 463 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 C1QL1O75973 258 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 PCSK1P29120 753 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 SLC6A9P48067 706 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 VAV2P52735 878 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 ATXN1P54253 815 aaKnown RBP5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 CACNA2D1P54289 1103 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 NOMO1Q15155 1222 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 FOXR2Q6PJQ5 311 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 LNX2Q8N448 690 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 HOOK2Q96ED9 719 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 CYFIP2Q96F07 1278 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 MYOCQ99972 504 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 AIFM2Q9BRQ8 373 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 ADI1Q9BV57 179 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 RHOBTB2Q9BYZ6 727 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 UNKLQ9H9P5 680 aaKnown RBP5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 KIAA1586Q9HCI6 787 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 FRMD4BQ9Y2L6 1034 aa5.91□□□□□ -1.46
PRPF40A-205ENST00000467114 MATN4O95460 622 aa5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 GSPT1P15170 499 aaKnown RBP5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 RECQLP46063 649 aaPredicted RBP5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 RAB27AP51159 221 aa5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 EPHB1P54762 984 aa5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 KRTAP10-11P60412 298 aa5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 MRPS35P82673 323 aaKnown RBP5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 NFE2Q16621 373 aaPredicted RBP5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 AMOTL1Q8IY63 956 aa5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 COA7Q96BR5 231 aa5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 CDH19Q9H159 772 aa5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 KCTD5Q9NXV2 234 aa5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 LRIT1Q9P2V4 623 aa5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 ZBTB21Q9ULJ3 1066 aa5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 ACTL7AQ9Y615 435 aa5.9□□□□□ -1.46
PRPF40A-205ENST00000467114 SETD1BQ9UPS6 1966 aaKnown RBP5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 ERN1O75460 977 aaKnown RBP5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 RBMXL2O75526 392 aaKnown RBP5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 ZFPL1O95159 310 aa5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 ALAS1P13196 640 aa5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 ADKP55263 362 aaKnown RBP5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 MTM1Q13496 603 aa5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 PIN1Q13526 163 aaPredicted RBP5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 UBE3BQ7Z3V4 1068 aa5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 COLGALT2Q8IYK4 626 aa5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 ACTRT2Q8TDY3 377 aa5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 NUP133Q8WUM0 1156 aa5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 PTCD3Q96EY7 689 aaKnown RBP5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 MED15Q96RN5 788 aa5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 LIMCH1Q9UPQ0 1083 aa5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 DMTF1Q9Y222 760 aa5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 MTO1Q9Y2Z2 717 aaKnown RBP5.89□□□□□ -1.47
PRPF40A-205ENST00000467114 FAM171A2A8MVW0 826 aa5.88□□□□□ -1.47
PRPF40A-205ENST00000467114 HTRA2O43464 458 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms