RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 IQCB1Q15051 598 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 DCAF17Q5H9S7 520 aaPredicted RBP17.26■□□□□ 0.35
GPC1-207ENST00000466624 TCERG1LQ5VWI1 586 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 KRT39Q6A163 491 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 CD300LGQ6UXG3 332 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 SV2AQ7L0J3 742 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 SPRED2Q7Z698 418 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 TMEM173Q86WV6 379 aaPredicted RBP17.26■□□□□ 0.35
GPC1-207ENST00000466624 RNF168Q8IYW5 571 aaPredicted RBP17.26■□□□□ 0.35
GPC1-207ENST00000466624 KLHL23Q8NBE8 558 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 C3orf58Q8NDZ4 430 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 FAM200AQ8TCP9 573 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 ZNF560Q96MR9 790 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 TSPY26PQ9H489 355 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 FANCLQ9NW38 375 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 MAGEC2Q9UBF1 373 aaPredicted RBP17.26■□□□□ 0.35
GPC1-207ENST00000466624 CACNG4Q9UBN1 327 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 SIX4Q9UIU6 781 aa17.26■□□□□ 0.35
GPC1-207ENST00000466624 VWA8A3KMH1 1905 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 KCNJ18B7U540 433 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 TULP1O00294 542 aaPredicted RBP17.25■□□□□ 0.35
GPC1-207ENST00000466624 P4HA2O15460 535 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 TRAPPC3O43617 180 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 TADA2AO75478 443 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 STAU1O95793 577 aaKnown RBP17.25■□□□□ 0.35
GPC1-207ENST00000466624 ITGB1P05556 798 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 POLR2BP30876 1174 aaKnown RBP17.25■□□□□ 0.35
GPC1-207ENST00000466624 AARSP49588 968 aaKnown RBP eCLIP17.25■□□□□ 0.35
GPC1-207ENST00000466624 MXI1P50539 228 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 KCNJ12Q14500 433 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 TCP11X2Q5H9J9 407 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 ZNF697Q5TEC3 545 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 TDRD10Q5VZ19 366 aaKnown RBP17.25■□□□□ 0.35
GPC1-207ENST00000466624 DDX53Q86TM3 631 aaKnown RBP17.25■□□□□ 0.35
GPC1-207ENST00000466624 BCL7CQ8WUZ0 217 aaPredicted RBP17.25■□□□□ 0.35
GPC1-207ENST00000466624 LRCH3Q96II8 777 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 LMAN2LQ9H0V9 348 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 CBX8Q9HC52 389 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 MTUS1Q9ULD2 1270 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 AGAP1Q9UPQ3 857 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 R3HCC1Q9Y3T6 440 aaKnown RBP17.25■□□□□ 0.35
GPC1-207ENST00000466624 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.25■□□□□ 0.35
GPC1-207ENST00000466624 ATG2AQ2TAZ0 1938 aa17.25■□□□□ 0.35
GPC1-207ENST00000466624 SF3B1O75533 1304 aaKnown RBP eCLIP17.24■□□□□ 0.35
GPC1-207ENST00000466624 TSC2P49815 1807 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 BECN2A8MW95 431 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 N4BP1O75113 896 aaKnown RBP17.24■□□□□ 0.35
GPC1-207ENST00000466624 ZNF18P17022 549 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 ATICP31939 592 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 MTIF2P46199 727 aaKnown RBP17.24■□□□□ 0.35
GPC1-207ENST00000466624 GCLMP48507 274 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 TAF6P49848 677 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 BIRC3Q13489 604 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 GPM6BQ13491 265 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 MAN2A1Q16706 1144 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 SV2CQ496J9 727 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 FUT10Q6P4F1 479 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 ARNTL2Q8WYA1 636 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 FAM84AQ96KN4 292 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 HSD3B7Q9H2F3 369 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 TTYH1Q9H313 450 aaPredicted RBP17.24■□□□□ 0.35
GPC1-207ENST00000466624 PUF60Q9UHX1 559 aaKnown RBP17.24■□□□□ 0.35
GPC1-207ENST00000466624 COQ4Q9Y3A0 265 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 NUB1Q9Y5A7 615 aa17.24■□□□□ 0.35
GPC1-207ENST00000466624 MYO9BQ13459 2157 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 F8W810 466 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 M0QZQ0 153 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 PPEF2O14830 753 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 PHACTR2O75167 634 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 VNN1O95497 513 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 CST3P01034 146 aaPredicted RBP17.23■□□□□ 0.35
GPC1-207ENST00000466624 AFPP02771 609 aaKnown RBP17.23■□□□□ 0.35
GPC1-207ENST00000466624 SOD2P04179 222 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 KRT19P08727 400 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 FMO5P49326 533 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 LILRA4P59901 499 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 KCNH2Q12809 1159 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 MYO1EQ12965 1108 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 TRPC3Q13507 836 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 NCOA4Q13772 614 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 GPR65Q8IYL9 337 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 TMEM130Q8N3G9 435 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 SPPL3Q8TCT6 385 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 RABGGTAQ92696 567 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 TAF4BQ92750 862 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 SUSD3Q96L08 255 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 TUBGCP2Q9BSJ2 902 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 HERC2P3Q9BVR0 1158 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 VRTNQ9H8Y1 702 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 CERS4Q9HA82 394 aa17.23■□□□□ 0.35
GPC1-207ENST00000466624 ARHGEF37A1IGU5 675 aa17.22■□□□□ 0.35
GPC1-207ENST00000466624 TPM4P67936 248 aa17.22■□□□□ 0.35
GPC1-207ENST00000466624 CBWD6Q4V339 395 aa17.22■□□□□ 0.35
GPC1-207ENST00000466624 CBWD3Q5JTY5 395 aa17.22■□□□□ 0.35
GPC1-207ENST00000466624 CBWD5Q5RIA9 395 aa17.22■□□□□ 0.35
GPC1-207ENST00000466624 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.22■□□□□ 0.35
GPC1-207ENST00000466624 FBXL13Q8NEE6 735 aa17.22■□□□□ 0.35
GPC1-207ENST00000466624 ANKRD20A12PQ8NF67 263 aa17.22■□□□□ 0.35
GPC1-207ENST00000466624 HASPINQ8TF76 798 aa17.22■□□□□ 0.35
GPC1-207ENST00000466624 HPDLQ96IR7 371 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms