RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 TMEM132AQ24JP5 1023 aa15.91■□□□□ 0.14
CXCR4-203ENST00000466288 C1orf228Q6PIY5 440 aa15.91■□□□□ 0.14
CXCR4-203ENST00000466288 CEP68Q76N32 757 aa15.91■□□□□ 0.14
CXCR4-203ENST00000466288 RUFY3Q7L099 469 aa15.91■□□□□ 0.14
CXCR4-203ENST00000466288 MCPH1Q8NEM0 835 aa15.91■□□□□ 0.14
CXCR4-203ENST00000466288 RSPRY1Q96DX4 576 aa15.91■□□□□ 0.14
CXCR4-203ENST00000466288 CEP72Q9P209 647 aa15.91■□□□□ 0.14
CXCR4-203ENST00000466288 FAM208BQ5VWN6 2430 aa15.9■□□□□ 0.14
CXCR4-203ENST00000466288 AXIN1O15169 862 aa15.9■□□□□ 0.14
CXCR4-203ENST00000466288 ZNF806P0C7X5 589 aa15.9■□□□□ 0.14
CXCR4-203ENST00000466288 SOX9P48436 509 aa15.9■□□□□ 0.14
CXCR4-203ENST00000466288 STK3Q13188 491 aa15.9■□□□□ 0.14
CXCR4-203ENST00000466288 CCDC6Q16204 474 aa15.9■□□□□ 0.14
CXCR4-203ENST00000466288 DCAF4L1Q3SXM0 396 aa15.9■□□□□ 0.14
CXCR4-203ENST00000466288 TPGS2Q68CL5 300 aa15.9■□□□□ 0.14
CXCR4-203ENST00000466288 IQCEQ6IPM2 695 aa15.9■□□□□ 0.14
CXCR4-203ENST00000466288 TXNDC11Q6PKC3 985 aa15.9■□□□□ 0.14
CXCR4-203ENST00000466288 CPLX2Q6PUV4 134 aaKnown RBP15.9■□□□□ 0.14
CXCR4-203ENST00000466288 WDR5BQ86VZ2 330 aa15.9■□□□□ 0.14
CXCR4-203ENST00000466288 ARRDC1-AS1Q9H2J1 176 aa15.9■□□□□ 0.14
CXCR4-203ENST00000466288 TTC12Q9H892 705 aaPredicted RBP15.9■□□□□ 0.14
CXCR4-203ENST00000466288 FBXL5Q9UKA1 691 aa15.9■□□□□ 0.14
CXCR4-203ENST00000466288 SMIM28A0A1B0GU29 152 aa15.89■□□□□ 0.13
CXCR4-203ENST00000466288 SYN3O14994 580 aa15.89■□□□□ 0.13
CXCR4-203ENST00000466288 LIG1P18858 919 aa15.89■□□□□ 0.13
CXCR4-203ENST00000466288 ATP2B1P20020 1258 aa15.89■□□□□ 0.13
CXCR4-203ENST00000466288 FCHO2Q0JRZ9 810 aa15.89■□□□□ 0.13
CXCR4-203ENST00000466288 TWF1Q12792 350 aa15.89■□□□□ 0.13
CXCR4-203ENST00000466288 TEAD2Q15562 447 aa15.89■□□□□ 0.13
CXCR4-203ENST00000466288 DGKKQ5KSL6 1271 aa15.89■□□□□ 0.13
CXCR4-203ENST00000466288 STPG1Q5TH74 334 aa15.89■□□□□ 0.13
CXCR4-203ENST00000466288 ELMOD1Q8N336 334 aa15.89■□□□□ 0.13
CXCR4-203ENST00000466288 C12orf50Q8NA57 414 aaPredicted RBP15.89■□□□□ 0.13
CXCR4-203ENST00000466288 CSGALNACT1Q8TDX6 532 aa15.89■□□□□ 0.13
CXCR4-203ENST00000466288 ZNF512Q96ME7 567 aaPredicted RBP15.89■□□□□ 0.13
CXCR4-203ENST00000466288 C8orf33Q9H7E9 229 aaPredicted RBP15.89■□□□□ 0.13
CXCR4-203ENST00000466288 ZSWIM6Q9HCJ5 1215 aa15.89■□□□□ 0.13
CXCR4-203ENST00000466288 SH2B1Q9NRF2 756 aaPredicted RBP15.89■□□□□ 0.13
CXCR4-203ENST00000466288 TICRRQ7Z2Z1 1910 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 MYBPHLA2RUH7 354 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 SLC38A8A6NNN8 435 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 CHADO15335 359 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 SPATA31C1P0DKV0 1188 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 MYL4P12829 197 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 HOXB3P14651 431 aaPredicted RBP15.88■□□□□ 0.13
CXCR4-203ENST00000466288 NAMPTP43490 491 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 KPNA1P52294 538 aaPredicted RBP15.88■□□□□ 0.13
CXCR4-203ENST00000466288 NR5A1Q13285 461 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 CALCRLQ16602 461 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 XKR4Q5GH76 650 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 NT5DC1Q5TFE4 455 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 ALKAL1Q6UXT8 129 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 LEMD2Q8NC56 503 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 SHKBP1Q8TBC3 707 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 E2F7Q96AV8 911 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 LOXL4Q96JB6 756 aa15.88■□□□□ 0.13
CXCR4-203ENST00000466288 LSM14BQ9BX40 385 aaKnown RBP15.88■□□□□ 0.13
CXCR4-203ENST00000466288 AFF4Q9UHB7 1163 aaKnown RBP15.88■□□□□ 0.13
CXCR4-203ENST00000466288 SPECC1L-ADORA2AF8WAN1 911 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 H7C4K7 107 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 PODXLO00592 558 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 EPN2O95208 641 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 KCNK5O95279 499 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 CTHP32929 405 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 TXKP42681 527 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 RAP1GAPP47736 663 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 CCINQ13939 588 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 PLA2G2CQ5R387 149 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 DEPTORQ8TB45 409 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 TNFRSF25Q93038 417 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 MTMR9Q96QG7 549 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 KIFC3Q9BVG8 833 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 GPR88Q9GZN0 384 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 ASAH2Q9NR71 780 aa15.87■□□□□ 0.13
CXCR4-203ENST00000466288 DAXXQ9UER7 740 aaPredicted RBP15.87■□□□□ 0.13
CXCR4-203ENST00000466288 WNT7AO00755 349 aa15.86■□□□□ 0.13
CXCR4-203ENST00000466288 DTNBO60941 627 aa15.86■□□□□ 0.13
CXCR4-203ENST00000466288 XBP1P17861 261 aa15.86■□□□□ 0.13
CXCR4-203ENST00000466288 CTXN3Q4LDR2 81 aa15.86■□□□□ 0.13
CXCR4-203ENST00000466288 ATF7IP2Q5U623 682 aa15.86■□□□□ 0.13
CXCR4-203ENST00000466288 RALGPS2Q86X27 583 aaPredicted RBP15.86■□□□□ 0.13
CXCR4-203ENST00000466288 CATSPER3Q86XQ3 398 aa15.86■□□□□ 0.13
CXCR4-203ENST00000466288 YAF2Q8IY57 180 aa15.86■□□□□ 0.13
CXCR4-203ENST00000466288 CEP120Q8N960 986 aa15.86■□□□□ 0.13
CXCR4-203ENST00000466288 GAB3Q8WWW8 586 aa15.86■□□□□ 0.13
CXCR4-203ENST00000466288 ZMAT2Q96NC0 199 aaKnown RBP15.86■□□□□ 0.13
CXCR4-203ENST00000466288 LRRC3BQ96PB8 259 aa15.86■□□□□ 0.13
CXCR4-203ENST00000466288 LRRC3Q9BY71 257 aa15.86■□□□□ 0.13
CXCR4-203ENST00000466288 MAFFQ9ULX9 164 aa15.86■□□□□ 0.13
CXCR4-203ENST00000466288 RBM19Q9Y4C8 960 aaKnown RBP15.86■□□□□ 0.13
CXCR4-203ENST00000466288 STK36Q9NRP7 1315 aa15.85■□□□□ 0.13
CXCR4-203ENST00000466288 C1QTNF9BB2RNN3 333 aa15.85■□□□□ 0.13
CXCR4-203ENST00000466288 C1QTNF9P0C862 333 aa15.85■□□□□ 0.13
CXCR4-203ENST00000466288 CYP11B2P19099 503 aa15.85■□□□□ 0.13
CXCR4-203ENST00000466288 SCRN1Q12765 414 aa15.85■□□□□ 0.13
CXCR4-203ENST00000466288 CACNA2D4Q7Z3S7 1137 aa15.85■□□□□ 0.13
CXCR4-203ENST00000466288 KBTBD6Q86V97 674 aa15.85■□□□□ 0.13
CXCR4-203ENST00000466288 TMC8Q8IU68 726 aa15.85■□□□□ 0.13
CXCR4-203ENST00000466288 SYNPOQ8N3V7 929 aa15.85■□□□□ 0.13
CXCR4-203ENST00000466288 SLITRK6Q9H5Y7 841 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms