RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 SLC29A3Q9BZD2 475 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 PRO3102Q9H379 93 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 SPTBN4Q9H254 2564 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 CLTCL1P53675 1640 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 TIAM2Q8IVF5 1701 aa4.01□□□□□ -1.77
CD55-207ENST00000465534 ATP7BP35670 1465 aa4□□□□□ -1.77
CD55-207ENST00000465534 TPRP12270 2363 aaKnown RBP4□□□□□ -1.77
CD55-207ENST00000465534 M0R2C6 588 aa4□□□□□ -1.77
CD55-207ENST00000465534 RBMXL2O75526 392 aaKnown RBP4□□□□□ -1.77
CD55-207ENST00000465534 MATN4O95460 622 aa4□□□□□ -1.77
CD55-207ENST00000465534 SPATA31D3P0C874 917 aa4□□□□□ -1.77
CD55-207ENST00000465534 DDX6P26196 483 aaKnown RBP eCLIP4□□□□□ -1.77
CD55-207ENST00000465534 MPLP40238 635 aa4□□□□□ -1.77
CD55-207ENST00000465534 ABCG1P45844 678 aa4□□□□□ -1.77
CD55-207ENST00000465534 MXRA7P84157 204 aa4□□□□□ -1.77
CD55-207ENST00000465534 MPP3Q13368 585 aa4□□□□□ -1.77
CD55-207ENST00000465534 EPHA7Q15375 998 aa4□□□□□ -1.77
CD55-207ENST00000465534 PDCD4Q53EL6 469 aaKnown RBP4□□□□□ -1.77
CD55-207ENST00000465534 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
CD55-207ENST00000465534 UNQ6494/PRO21346Q6UXR6 183 aa4□□□□□ -1.77
CD55-207ENST00000465534 SPATA31D4Q6ZUB0 917 aa4□□□□□ -1.77
CD55-207ENST00000465534 KANSL1Q7Z3B3 1105 aa4□□□□□ -1.77
CD55-207ENST00000465534 PHYKPLQ8IUZ5 450 aa4□□□□□ -1.77
CD55-207ENST00000465534 SYT12Q8IV01 421 aa4□□□□□ -1.77
CD55-207ENST00000465534 SLC44A3Q8N4M1 653 aa4□□□□□ -1.77
CD55-207ENST00000465534 C7orf31Q8N865 590 aa4□□□□□ -1.77
CD55-207ENST00000465534 KIAA1958Q8N8K9 716 aa4□□□□□ -1.77
CD55-207ENST00000465534 ZNF384Q8TF68 577 aa4□□□□□ -1.77
CD55-207ENST00000465534 SLC9A6Q92581 669 aa4□□□□□ -1.77
CD55-207ENST00000465534 UHRF1Q96T88 793 aaPredicted RBP4□□□□□ -1.77
CD55-207ENST00000465534 KIAA1586Q9HCI6 787 aa4□□□□□ -1.77
CD55-207ENST00000465534 CABP5Q9NP86 173 aa4□□□□□ -1.77
CD55-207ENST00000465534 INTS7Q9NVH2 962 aaKnown RBP4□□□□□ -1.77
CD55-207ENST00000465534 SAGE1Q9NXZ1 904 aa4□□□□□ -1.77
CD55-207ENST00000465534 TFCP2L1Q9NZI6 479 aa4□□□□□ -1.77
CD55-207ENST00000465534 MAP3K2Q9Y2U5 619 aa4□□□□□ -1.77
CD55-207ENST00000465534 TECPR2O15040 1411 aa4□□□□□ -1.77
CD55-207ENST00000465534 CRB1P82279 1406 aa4□□□□□ -1.77
CD55-207ENST00000465534 CCDC163A0A0D9SF12 145 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 B4E1Z4 1266 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 KIF3BO15066 747 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 PRPF6O94906 941 aaKnown RBP3.99□□□□□ -1.77
CD55-207ENST00000465534 SPDEFO95238 335 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 EGR2P11161 476 aaPredicted RBP3.99□□□□□ -1.77
CD55-207ENST00000465534 GZMKP49863 264 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
CD55-207ENST00000465534 GPRIN1Q7Z2K8 1008 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 UNC5BQ8IZJ1 945 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 CHST14Q8NCH0 376 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 MYL10Q9BUA6 226 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 DUSP26Q9BV47 211 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 MRPL4Q9BYD3 311 aaKnown RBP3.99□□□□□ -1.77
CD55-207ENST00000465534 SAMD15Q9P1V8 674 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 SIRPGQ9P1W8 387 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 HDAC9Q9UKV0 1011 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 SALL3Q9BXA9 1300 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 AKAP12Q02952 1782 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 TRPM1Q7Z4N2 1603 aa3.99□□□□□ -1.77
CD55-207ENST00000465534 KIAA0100Q14667 2235 aaKnown RBP3.99□□□□□ -1.77
CD55-207ENST00000465534 PTPDC1A2A3K4 754 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 GLRX3O76003 335 aaKnown RBP3.98□□□□□ -1.77
CD55-207ENST00000465534 ITGAMP11215 1152 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 DUSP2Q05923 314 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 CD69Q07108 199 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 KIAA1841Q6NSI8 718 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 FBXO46Q6PJ61 603 aaPredicted RBP3.98□□□□□ -1.77
CD55-207ENST00000465534 BTNL9Q6UXG8 535 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 ARHGEF25Q86VW2 580 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 TICAM2Q86XR7 235 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 C9orf106Q8NAJ2 232 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 ANKS1AQ92625 1134 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 NAP1L2Q9ULW6 460 aaPredicted RBP3.98□□□□□ -1.77
CD55-207ENST00000465534 AKAP11Q9UKA4 1901 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 RANBP2P49792 3224 aaKnown RBP3.98□□□□□ -1.77
CD55-207ENST00000465534 SPATA31A3Q5VYP0 1347 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 ZNF292O60281 2723 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 XRN1Q8IZH2 1706 aaKnown RBP3.98□□□□□ -1.77
CD55-207ENST00000465534 SLC9A1P19634 815 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 RESTQ13127 1097 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 ESRP1Q6NXG1 681 aaKnown RBP3.98□□□□□ -1.77
CD55-207ENST00000465534 ZNF366Q8N895 744 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 OR10H5Q8NGA6 315 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 PPP1R14CQ8TAE6 165 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 IPO4Q8TEX9 1081 aaKnown RBP3.98□□□□□ -1.77
CD55-207ENST00000465534 POFUT1Q9H488 388 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 TRIM39Q9HCM9 518 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 POGKQ9P215 609 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 USP36Q9P275 1121 aaKnown RBP3.98□□□□□ -1.77
CD55-207ENST00000465534 USP35Q9P2H5 1018 aa3.98□□□□□ -1.77
CD55-207ENST00000465534 CEP152O94986 1710 aa3.97□□□□□ -1.77
CD55-207ENST00000465534 N4BP2Q86UW6 1770 aaPredicted RBP3.97□□□□□ -1.77
CD55-207ENST00000465534 TEP1Q99973 2627 aaKnown RBP3.97□□□□□ -1.77
CD55-207ENST00000465534 GCN1Q92616 2671 aaKnown RBP3.97□□□□□ -1.77
CD55-207ENST00000465534 MAST3O60307 1309 aa3.97□□□□□ -1.77
CD55-207ENST00000465534 LY86O95711 162 aa3.97□□□□□ -1.77
CD55-207ENST00000465534 MGAT1P26572 445 aa3.97□□□□□ -1.77
CD55-207ENST00000465534 TNS3Q68CZ2 1445 aa3.97□□□□□ -1.77
CD55-207ENST00000465534 ZCCHC8Q6NZY4 707 aaKnown RBP3.97□□□□□ -1.77
CD55-207ENST00000465534 ZZZ3Q8IYH5 903 aa3.97□□□□□ -1.77
CD55-207ENST00000465534 ZSWIM2Q8NEG5 633 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms