RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 BMS1Q14692 1282 aaKnown RBP12.62□□□□□ -0.39
CUX1-207ENST00000465461 CTC1Q2NKJ3 1217 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 RSPO2Q6UXX9 243 aaPredicted RBP12.62□□□□□ -0.39
CUX1-207ENST00000465461 SPATA31D4Q6ZUB0 917 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 PALB2Q86YC2 1186 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.62□□□□□ -0.39
CUX1-207ENST00000465461 C12orf56Q8IXR9 622 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 EFHBQ8N7U6 833 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 C1orf127Q8N9H9 656 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 LNX1Q8TBB1 728 aaPredicted RBP12.62□□□□□ -0.39
CUX1-207ENST00000465461 ZNF516Q92618 1163 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 PPP2R3CQ969Q6 453 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 TTPALQ9BTX7 342 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 MTMR12Q9C0I1 747 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 GZF1Q9H116 711 aaPredicted RBP12.62□□□□□ -0.39
CUX1-207ENST00000465461 CLEC1BQ9P126 229 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 THEGQ9P2T0 379 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 TRAF3IP3Q9Y228 551 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 DERAQ9Y315 318 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 C2CD2Q9Y426 696 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 IRAK3Q9Y616 596 aa12.62□□□□□ -0.39
CUX1-207ENST00000465461 TRANK1O15050 2925 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 COL6A3P12111 3177 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 ANO9A1A5B4 782 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 KIF20AO95235 890 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 KRT19P08727 400 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 NR2F2P24468 414 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 POLR2BP30876 1174 aaKnown RBP12.61□□□□□ -0.39
CUX1-207ENST00000465461 DLG4P78352 724 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 POU5F1Q01860 360 aaKnown RBP12.61□□□□□ -0.39
CUX1-207ENST00000465461 KCNC3Q14003 757 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 MORC3Q14149 939 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 COL19A1Q14993 1142 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 PSMD6Q15008 389 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 ZCWPW2Q504Y3 356 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 ANKRD40Q6AI12 368 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 KLHL10Q6JEL2 608 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 DSTYKQ6XUX3 929 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.61□□□□□ -0.39
CUX1-207ENST00000465461 ADSSL1Q8N142 457 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 CSGALNACT2Q8N6G5 542 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 GOLGA5Q8TBA6 731 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 SLC22A17Q8WUG5 538 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 MFSD14AQ96MC6 490 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 EMILIN2Q9BXX0 1053 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 CLSTN2Q9H4D0 955 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 KIAA1586Q9HCI6 787 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 INTS13Q9NVM9 706 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 CGNQ9P2M7 1197 aaKnown RBP12.61□□□□□ -0.39
CUX1-207ENST00000465461 AGAP1Q9UPQ3 857 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 HCFC2Q9Y5Z7 792 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 REV3LO60673 3130 aa12.61□□□□□ -0.39
CUX1-207ENST00000465461 LRRIQ3A6PVS8 624 aaPredicted RBP12.6□□□□□ -0.39
CUX1-207ENST00000465461 PPP1R3GB7ZBB8 358 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 TRAPPC3O43617 180 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 AKAP3O75969 853 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 TMEM191BP0C7N4 346 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 TNNI1P19237 187 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 CLCN4P51793 760 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 CDR1P51861 262 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 STX17P56962 302 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 LILRA4P59901 499 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 ELAVL2Q12926 359 aaKnown RBP12.6□□□□□ -0.39
CUX1-207ENST00000465461 ADAM9Q13443 819 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 PSMD5Q16401 504 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 SLC9A9Q8IVB4 645 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 C12orf76Q8N812 135 aaPredicted RBP12.6□□□□□ -0.39
CUX1-207ENST00000465461 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.6□□□□□ -0.39
CUX1-207ENST00000465461 CXorf38Q8TB03 319 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 CACTINQ8WUQ7 758 aaKnown RBP12.6□□□□□ -0.39
CUX1-207ENST00000465461 ELMO3Q96BJ8 720 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 SUSD3Q96L08 255 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 TSPAN18Q96SJ8 248 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 CDCA3Q99618 268 aaPredicted RBP12.6□□□□□ -0.39
CUX1-207ENST00000465461 CLSTN3Q9BQT9 956 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 RXFP1Q9HBX9 757 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 KIAA1468Q9P260 1216 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 STK39Q9UEW8 545 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 SIX4Q9UIU6 781 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 CDH22Q9UJ99 828 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 COG5Q9UP83 839 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 SCN1AP35498 2009 aa12.6□□□□□ -0.39
CUX1-207ENST00000465461 PLXNA3P51805 1871 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 NCK2O43639 380 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 CST3P01034 146 aaPredicted RBP12.59□□□□□ -0.39
CUX1-207ENST00000465461 WEE2P0C1S8 567 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 ARPP19P56211 112 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 BFSP1Q12934 665 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 DUOXA2Q1HG44 320 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 VARS2Q5ST30 1063 aaKnown RBP12.59□□□□□ -0.39
CUX1-207ENST00000465461 CENPPQ6IPU0 288 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 NT5DC4Q86YG4 428 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 WDR49Q8IV35 697 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 PIK3R5Q8WYR1 880 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 BORCS6Q96GS4 357 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 ANKRD36BP1Q96IX9 119 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 SENP8Q96LD8 212 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 FNBP1Q96RU3 617 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 CGRRF1Q99675 332 aa12.59□□□□□ -0.39
CUX1-207ENST00000465461 NUP62CLQ9H1M0 184 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms