RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 TROQ12816 1431 aaPredicted RBP5.95□□□□□ -1.46
UBR4-209ENST00000465036 MUM1Q2TAK8 710 aa5.95□□□□□ -1.46
UBR4-209ENST00000465036 FOXR2Q6PJQ5 311 aa5.95□□□□□ -1.46
UBR4-209ENST00000465036 SEM1Q6ZVN7 128 aa5.95□□□□□ -1.46
UBR4-209ENST00000465036 MICALCLQ6ZW33 695 aa5.95□□□□□ -1.46
UBR4-209ENST00000465036 COLGALT2Q8IYK4 626 aa5.95□□□□□ -1.46
UBR4-209ENST00000465036 FAM177A1Q8N128 213 aaPredicted RBP5.95□□□□□ -1.46
UBR4-209ENST00000465036 PQLC1Q8N2U9 271 aa5.95□□□□□ -1.46
UBR4-209ENST00000465036 ZNF384Q8TF68 577 aa5.95□□□□□ -1.46
UBR4-209ENST00000465036 UNKLQ9H9P5 680 aaKnown RBP5.95□□□□□ -1.46
UBR4-209ENST00000465036 LANCL2Q9NS86 450 aa5.95□□□□□ -1.46
UBR4-209ENST00000465036 KCTD5Q9NXV2 234 aa5.95□□□□□ -1.46
UBR4-209ENST00000465036 SIK3Q9Y2K2 1263 aa5.95□□□□□ -1.46
UBR4-209ENST00000465036 FYCO1Q9BQS8 1478 aa5.95□□□□□ -1.46
UBR4-209ENST00000465036 ARAP3Q8WWN8 1544 aa5.94□□□□□ -1.46
UBR4-209ENST00000465036 PDE8AO60658 829 aa5.94□□□□□ -1.46
UBR4-209ENST00000465036 CKBP12277 381 aa5.94□□□□□ -1.46
UBR4-209ENST00000465036 ITGB6P18564 788 aa5.94□□□□□ -1.46
UBR4-209ENST00000465036 CDK17Q00537 523 aa5.94□□□□□ -1.46
UBR4-209ENST00000465036 MUM1L1Q5H9M0 696 aa5.94□□□□□ -1.46
UBR4-209ENST00000465036 KCNK18Q7Z418 384 aa5.94□□□□□ -1.46
UBR4-209ENST00000465036 ACTRT2Q8TDY3 377 aa5.94□□□□□ -1.46
UBR4-209ENST00000465036 MED15Q96RN5 788 aa5.94□□□□□ -1.46
UBR4-209ENST00000465036 HEPHQ9BQS7 1158 aa5.94□□□□□ -1.46
UBR4-209ENST00000465036 FANCAO15360 1455 aa5.94□□□□□ -1.46
UBR4-209ENST00000465036 NEO1Q92859 1461 aa5.94□□□□□ -1.46
UBR4-209ENST00000465036 FRMPD1Q5SYB0 1578 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 PLCH2O75038 1416 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 AKNAQ7Z591 1439 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 LRRC3CA6NJW4 275 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 ERBB2P04626 1255 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 HSD11B2P80365 405 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 PPP3CAQ08209 521 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 KIAA0895LQ68EN5 471 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 ARHGEF25Q86VW2 580 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 LMBR1Q8WVP7 490 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 PTCD3Q96EY7 689 aaKnown RBP5.93□□□□□ -1.46
UBR4-209ENST00000465036 CYFIP2Q96F07 1278 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 UHRF1Q96T88 793 aaPredicted RBP5.93□□□□□ -1.46
UBR4-209ENST00000465036 TTC1Q99614 292 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 TIMP4Q99727 224 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 IFT122Q9HBG6 1241 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 ARPP21Q9UBL0 812 aaPredicted RBP5.93□□□□□ -1.46
UBR4-209ENST00000465036 EDARQ9UNE0 448 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 APOBEC2Q9Y235 224 aaKnown RBP5.93□□□□□ -1.46
UBR4-209ENST00000465036 CCDC18Q5T9S5 1454 aa5.93□□□□□ -1.46
UBR4-209ENST00000465036 CCDC78A2IDD5 438 aa5.92□□□□□ -1.46
UBR4-209ENST00000465036 NEMP1O14524 444 aa5.92□□□□□ -1.46
UBR4-209ENST00000465036 ENDOD1O94919 500 aa5.92□□□□□ -1.46
UBR4-209ENST00000465036 RAP2AP10114 183 aa5.92□□□□□ -1.46
UBR4-209ENST00000465036 ALAS1P13196 640 aa5.92□□□□□ -1.46
UBR4-209ENST00000465036 PER3P56645 1201 aa5.92□□□□□ -1.46
UBR4-209ENST00000465036 EPHA10Q5JZY3 1008 aa5.92□□□□□ -1.46
UBR4-209ENST00000465036 SP5Q6BEB4 398 aaPredicted RBP5.92□□□□□ -1.46
UBR4-209ENST00000465036 NUP133Q8WUM0 1156 aa5.92□□□□□ -1.46
UBR4-209ENST00000465036 UROC1Q96N76 676 aa5.92□□□□□ -1.46
UBR4-209ENST00000465036 SENP6Q9GZR1 1112 aaPredicted RBP5.92□□□□□ -1.46
UBR4-209ENST00000465036 KLK15Q9H2R5 256 aa5.92□□□□□ -1.46
UBR4-209ENST00000465036 TMEM140Q9NV12 185 aa5.92□□□□□ -1.46
UBR4-209ENST00000465036 SLC23A1Q9UHI7 598 aa5.92□□□□□ -1.46
UBR4-209ENST00000465036 ADGRL1O94910 1474 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 PRSS23O95084 383 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 MYCLP1P12525 358 aaPredicted RBP5.91□□□□□ -1.46
UBR4-209ENST00000465036 WT1P19544 449 aaPredicted RBP5.91□□□□□ -1.46
UBR4-209ENST00000465036 MCAMP43121 646 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 ALDH1A3P47895 512 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 ZNF529Q6P280 563 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 C1QL2Q7Z5L3 287 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 PNKPQ96T60 521 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 C1QTNF7Q9BXJ2 289 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 CHMP4AQ9BY43 222 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 FBXO34Q9NWN3 711 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 USP25Q9UHP3 1055 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 PHLDB1Q86UU1 1377 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 CDC42BPBQ9Y5S2 1711 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 VPS8Q8N3P4 1428 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 SCAPERQ9BY12 1400 aa5.91□□□□□ -1.46
UBR4-209ENST00000465036 DENND4BO75064 1496 aaPredicted RBP5.9□□□□□ -1.46
UBR4-209ENST00000465036 ARHGAP5Q13017 1502 aa5.9□□□□□ -1.46
UBR4-209ENST00000465036 ARHGEF12Q9NZN5 1544 aa5.9□□□□□ -1.46
UBR4-209ENST00000465036 CCDC151A5D8V7 595 aa5.9□□□□□ -1.46
UBR4-209ENST00000465036 DNAJC9-AS1A6NH13 148 aa5.9□□□□□ -1.46
UBR4-209ENST00000465036 SLC6A2P23975 617 aa5.9□□□□□ -1.46
UBR4-209ENST00000465036 FOLR3P41439 243 aa5.9□□□□□ -1.46
UBR4-209ENST00000465036 FAPQ12884 760 aa5.9□□□□□ -1.46
UBR4-209ENST00000465036 MALLQ13021 153 aa5.9□□□□□ -1.46
UBR4-209ENST00000465036 EFCAB2Q5VUJ9 269 aa5.9□□□□□ -1.46
UBR4-209ENST00000465036 DDX46Q7L014 1031 aaKnown RBP5.9□□□□□ -1.46
UBR4-209ENST00000465036 GRASPQ7Z6J2 395 aaPredicted RBP5.9□□□□□ -1.46
UBR4-209ENST00000465036 RNF180Q86T96 592 aa5.9□□□□□ -1.46
UBR4-209ENST00000465036 SH2D3CQ8N5H7 860 aa5.9□□□□□ -1.46
UBR4-209ENST00000465036 Q8NA96 180 aa5.9□□□□□ -1.46
UBR4-209ENST00000465036 FBXO18Q8NFZ0 1043 aa5.9□□□□□ -1.46
UBR4-209ENST00000465036 SMG7Q92540 1137 aaKnown RBP5.9□□□□□ -1.46
UBR4-209ENST00000465036 ACE2Q9BYF1 805 aaPredicted RBP5.9□□□□□ -1.46
UBR4-209ENST00000465036 MTO1Q9Y2Z2 717 aaKnown RBP5.9□□□□□ -1.46
UBR4-209ENST00000465036 ENTPD2Q9Y5L3 495 aa5.9□□□□□ -1.46
UBR4-209ENST00000465036 MRPL42Q9Y6G3 142 aaKnown RBP5.9□□□□□ -1.46
UBR4-209ENST00000465036 RICTORQ6R327 1708 aa5.9□□□□□ -1.47
UBR4-209ENST00000465036 MYO5CQ9NQX4 1742 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms