RNA–Protein interactions for RNA: ENST00000464592.5

BRD2-208, Transcript of bromodomain containing 2, human

TSL 5

Gene BRD2, Length 1,590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD2-208	ENST00000464592	LNX1	Q8TBB1	728 aa	Predicted RBP	11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	CASP10	Q92851	521 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	CCDC47	Q96A33	483 aa	Known RBP	11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	CCDC34	Q96HJ3	373 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	FBXL18	Q96ME1	805 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	TIGD1	Q96MW7	591 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	NECAB3	Q96P71	396 aa	Predicted RBP	11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	SSX2IP	Q9Y2D8	614 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	DERA	Q9Y315	318 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	PTPRJ	Q12913	1337 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	ANO9	A1A5B4	782 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	KIAA0391	O15091	583 aa	Known RBP	11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	SPTLC1	O15269	473 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	ADAM12	O43184	909 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	TRAPPC3	O43617	180 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	KIN	O60870	393 aa	Known RBP	11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	PRPF40A	O75400	957 aa	Known RBP	11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	ADH1A	P07327	375 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	SRGAP2B	P0DMP2	458 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	SMAD4	Q13485	552 aa	Known RBP	11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	SNRNP35	Q16560	246 aa	Known RBP	11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	C9orf57	Q5W0N0	161 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	PALB2	Q86YC2	1186 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	C12orf56	Q8IXR9	622 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	C12orf76	Q8N812	135 aa	Predicted RBP	11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	ADAMTS19	Q8TE59	1207 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	SUSD3	Q96L08	255 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	TSPAN18	Q96SJ8	248 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	CLSTN3	Q9BQT9	956 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	MTMR12	Q9C0I1	747 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	DPP3	Q9NY33	737 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	FNIP2	Q9P278	1114 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592	PCDHA5	Q9Y5H7	936 aa		11.62	□□□□□ -0.55
BRD2-208	ENST00000464592		A0A0C4DFX4	3053 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	PLXNA3	P51805	1871 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	ZNF233	A6NK53	670 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	TGM5	O43548	720 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	GLUD1	P00367	558 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	ITGB3	P05106	788 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	SPATA31D3	P0C874	917 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	AARS	P49588	968 aa	Known RBP eCLIP	11.61	□□□□□ -0.55	1e-11	■□□□□ 8.7
BRD2-208	ENST00000464592	UBE2H	P62256	183 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	SNRPF	P62306	86 aa	Known RBP	11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	VARS2	Q5ST30	1063 aa	Known RBP	11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	SPATA31D4	Q6ZUB0	917 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	PPFIBP1	Q86W92	1011 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	GPR65	Q8IYL9	337 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	C1orf127	Q8N9H9	656 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	XXYLT1	Q8NBI6	393 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	SPATA20	Q8TB22	786 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	S1PR5	Q9H228	398 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	MAN1C1	Q9NR34	630 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	MTRR	Q9UBK8	725 aa		11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	USP15	Q9Y4E8	981 aa	Predicted RBP	11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	TCF20	Q9UGU0	1960 aa	Known RBP	11.61	□□□□□ -0.55
BRD2-208	ENST00000464592	PIR	O00625	290 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	PDXK	O00764	312 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	SYN3	O14994	580 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	EXOC3	O60645	756 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	WEE2	P0C1S8	567 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	TMEM191B	P0C7N4	346 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	POLR2B	P30876	1174 aa	Known RBP	11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	CASP4	P49662	377 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	LILRA4	P59901	499 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	CREM	Q03060	361 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	CYP24A1	Q07973	514 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	RARS2	Q5T160	578 aa	Known RBP	11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	ANKS3	Q6ZW76	656 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	NT5DC4	Q86YG4	428 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	GUF1	Q8N442	669 aa	Known RBP	11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	OR5B17	Q8NGF7	314 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	PLEKHO2	Q8TD55	490 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	SMARCE1	Q969G3	411 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	GSDMA	Q96QA5	445 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	GZF1	Q9H116	711 aa	Predicted RBP	11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	KIAA1586	Q9HCI6	787 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	DMAC2	Q9NW81	257 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	CGN	Q9P2M7	1197 aa	Known RBP	11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	CDY1	Q9Y6F8	540 aa		11.6	□□□□□ -0.55
BRD2-208	ENST00000464592	SPDYE4	A6NLX3	237 aa		11.59	□□□□□ -0.55
BRD2-208	ENST00000464592		M0QZQ0	153 aa		11.59	□□□□□ -0.55
BRD2-208	ENST00000464592	SMC2	O95347	1197 aa		11.59	□□□□□ -0.55
BRD2-208	ENST00000464592	NR3C1	P04150	777 aa		11.59	□□□□□ -0.55
BRD2-208	ENST00000464592	DLAT	P10515	647 aa	Known RBP	11.59	□□□□□ -0.55
BRD2-208	ENST00000464592	OR1D2	P34982	312 aa		11.59	□□□□□ -0.55
BRD2-208	ENST00000464592	PSMD6	Q15008	389 aa		11.59	□□□□□ -0.55
BRD2-208	ENST00000464592	SMAD2	Q15796	467 aa	Known RBP	11.59	□□□□□ -0.55
BRD2-208	ENST00000464592	ISM2	Q6H9L7	571 aa		11.59	□□□□□ -0.55
BRD2-208	ENST00000464592	LILRA6	Q6PI73	481 aa		11.59	□□□□□ -0.55
BRD2-208	ENST00000464592	TMC5	Q6UXY8	1006 aa		11.59	□□□□□ -0.55
BRD2-208	ENST00000464592	DSTYK	Q6XUX3	929 aa		11.59	□□□□□ -0.55
BRD2-208	ENST00000464592	CXorf38	Q8TB03	319 aa		11.59	□□□□□ -0.55
BRD2-208	ENST00000464592	GOLGA5	Q8TBA6	731 aa		11.59	□□□□□ -0.55
BRD2-208	ENST00000464592	CCDC127	Q96BQ5	260 aa		11.59	□□□□□ -0.55
BRD2-208	ENST00000464592	SENP8	Q96LD8	212 aa		11.59	□□□□□ -0.55

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