RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 FNBP1Q96RU3 617 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 INTS13Q9NVM9 706 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 CLDND1Q9NY35 253 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 FRMD4BQ9Y2L6 1034 aa15.7■□□□□ 0.1
SQSTM1-205ENST00000464493 ANO9A1A5B4 782 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 PPEF2O14830 753 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 LINC01565O15544 149 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 CNPP09543 421 aaKnown RBP15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 DLATP10515 647 aaKnown RBP15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 TNNI1P19237 187 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 BMP6P22004 513 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 FGFR3P22607 806 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 NR2F2P24468 414 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 PPP1R2P41236 205 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 CASP4P49662 377 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 LILRA4P59901 499 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 DUOXA2Q1HG44 320 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 EDRF1Q3B7T1 1238 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 ZCWPW2Q504Y3 356 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 CEP135Q66GS9 1140 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 WDR49Q8IV35 697 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 TRIML1Q8N9V2 468 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 GPT2Q8TD30 523 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 DHTKD1Q96HY7 919 aaPredicted RBP15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 ANKRD36BP1Q96IX9 119 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 SUSD3Q96L08 255 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 NUP62CLQ9H1M0 184 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 UBE2ZQ9H832 354 aaPredicted RBP15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 RXFP1Q9HBX9 757 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 BRWD1Q9NSI6 2320 aa15.69■□□□□ 0.1
SQSTM1-205ENST00000464493 UNC80Q8N2C7 3258 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 PSMA7O14818 248 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 SYN3O14994 580 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 TNNC2P02585 160 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 TMEM191BP0C7N4 346 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 CD44P16070 742 aaKnown RBP15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 PAX3P23760 479 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 KLRC2P26717 231 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 TKTP29401 623 aaKnown RBP15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 AARSP49588 968 aaKnown RBP eCLIP15.68■□□□□ 0.11e-7■□□□□ 8.5
SQSTM1-205ENST00000464493 CREMQ03060 361 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 KCNC3Q14003 757 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 LMBRD2Q68DH5 695 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 PDXDC1Q6P996 788 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 PRSS55Q6UWB4 352 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 PPFIBP1Q86W92 1011 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 CSGALNACT2Q8N6G5 542 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 C1orf127Q8N9H9 656 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 LNX1Q8TBB1 728 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 PIK3R5Q8WYR1 880 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 POP1Q99575 1024 aaKnown RBP15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 TSG101Q99816 390 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 MTMR12Q9C0I1 747 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 FNIP2Q9P278 1114 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 THEGQ9P2T0 379 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 ITGA11Q9UKX5 1188 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 VWA8A3KMH1 1905 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 PTPRJQ12913 1337 aa15.68■□□□□ 0.1
SQSTM1-205ENST00000464493 PPP1R3GB7ZBB8 358 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 M0QZQ0 153 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 MAPK13O15264 365 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 TEX28O15482 410 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 ITGB3P05106 788 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 KCNA5P22460 613 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 CCNE1P24864 410 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 POLR2BP30876 1174 aaKnown RBP15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 LTBRP36941 435 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 NDUFV1P49821 464 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 RBP5P82980 135 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 LRRC63Q05C16 580 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 PSMD5Q16401 504 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 ANKRD40Q6AI12 368 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 LLGL2Q6P1M3 1020 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 DSTYKQ6XUX3 929 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 TMEM184AQ6ZMB5 413 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 ANKS3Q6ZW76 656 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 APPL2Q8NEU8 664 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 VN1R2Q8NFZ6 395 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 OR5B17Q8NGF7 314 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 PARD3BQ8TEW8 1205 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 FAM84AQ96KN4 292 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 CGRRF1Q99675 332 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 PCDHB8Q9UN66 801 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 AGAP1Q9UPQ3 857 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 R3HCC1Q9Y3T6 440 aaKnown RBP15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 HCFC2Q9Y5Z7 792 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 SCN1AP35498 2009 aa15.67■□□□□ 0.1
SQSTM1-205ENST00000464493 CETN3O15182 167 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 SPTLC1O15269 473 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 AKAP3O75969 853 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 GLP2RO95838 553 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 ADH1AP07327 375 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 KRT19P08727 400 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 SRGAP2BP0DMP2 458 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 RPL17P18621 184 aaKnown RBP15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 PSMC2P35998 433 aaKnown RBP15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 PNPLA4P41247 253 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 TAF6P49848 677 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 PMS1P54277 932 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms