RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 NT5DC3Q86UY8 548 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 CCNYL1Q8N7R7 359 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 C4orf32Q8N8J7 132 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 DCPSQ96C86 337 aaKnown RBP9.58□□□□□ -0.88
HPS4-208ENST00000464362 HDAC11Q96DB2 347 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 KLHL8Q9P2G9 620 aaPredicted RBP9.58□□□□□ -0.88
HPS4-208ENST00000464362 SUGT1Q9Y2Z0 365 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.58□□□□□ -0.88
HPS4-208ENST00000464362 CNTNAP4Q9C0A0 1308 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 EIF3DO15371 548 aaKnown RBP eCLIP9.58□□□□□ -0.88
HPS4-208ENST00000464362 KCNN4O15554 427 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 DGAT1O75907 488 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 KRT38O76015 456 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 SLITRK3O94933 977 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 GGPS1O95749 300 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 PDGFRAP16234 1089 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 GARSP41250 739 aaKnown RBP9.58□□□□□ -0.88
HPS4-208ENST00000464362 DLG4P78352 724 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 SAMD7Q7Z3H4 446 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 MYLK4Q86YV6 388 aaPredicted RBP9.58□□□□□ -0.88
HPS4-208ENST00000464362 FAM49BQ9NUQ9 324 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 CTNNAL1Q9UBT7 734 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 HAO1Q9UJM8 370 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 COL5A2P05997 1499 aaPredicted RBP9.58□□□□□ -0.88
HPS4-208ENST00000464362 NOL3O60936 208 aaKnown RBP9.58□□□□□ -0.88
HPS4-208ENST00000464362 HSPA4LO95757 839 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 SHBGP04278 402 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 TBXAS1P24557 533 aaPredicted RBP9.58□□□□□ -0.88
HPS4-208ENST00000464362 AARSP49588 968 aaKnown RBP eCLIP9.58□□□□□ -0.88
HPS4-208ENST00000464362 STAT5BP51692 787 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 RHBDL3P58872 404 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 TMEM119Q4V9L6 283 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 CAPRIN2Q6IMN6 1127 aaKnown RBP9.58□□□□□ -0.88
HPS4-208ENST00000464362 PRUNE1Q86TP1 453 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 UBA3Q8TBC4 463 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 PWWP2AQ96N64 755 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 TTC25Q96NG3 672 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 C10orf88Q9H8K7 445 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 TMEM8AQ9HCN3 771 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 GEMIN8Q9NWZ8 242 aaKnown RBP9.58□□□□□ -0.88
HPS4-208ENST00000464362 STOML1Q9UBI4 398 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 SLC4A7Q9Y6M7 1214 aa9.58□□□□□ -0.88
HPS4-208ENST00000464362 LOC100653049A0A140TA62 436 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 CFAP73A6NFT4 308 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 SPECC1L-ADORA2AF8WAN1 911 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 KRT34O76011 436 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 KRT7P08729 469 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 KRT4P19013 534 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 NPTX2P47972 431 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 NLRP11P59045 1033 aaKnown RBP9.57□□□□□ -0.88
HPS4-208ENST00000464362 TMEM62Q0P6H9 643 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 RABGAP1LQ5R372 815 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 RWDD4Q6NW29 188 aaKnown RBP9.57□□□□□ -0.88
HPS4-208ENST00000464362 RGS9BPQ6ZS82 235 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 EMC1Q8N766 993 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 FAM71DQ8N9W8 422 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 SPATA18Q8TC71 538 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 SLC26A7Q8TE54 656 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 OTUD5Q96G74 571 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 SENP7Q9BQF6 1050 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 TMEM121Q9BTD3 319 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 SUDS3Q9H7L9 328 aaPredicted RBP9.57□□□□□ -0.88
HPS4-208ENST00000464362 TBX20Q9UMR3 447 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 TLR2O60603 784 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 FLT3P36888 993 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 NUMBP49757 651 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 ROR1Q01973 937 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 NME3Q13232 169 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 KLHL38Q2WGJ6 581 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 ATG16L1Q676U5 607 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 C4orf50Q6ZRC1 276 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 RTKN2Q8IZC4 609 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 SIX6OS1Q8N1H7 587 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 MORC4Q8TE76 937 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 TSC22D3Q99576 134 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 RIT2Q99578 217 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 ASNSD1Q9NWL6 643 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 CASQ2O14958 399 aaPredicted RBP9.57□□□□□ -0.88
HPS4-208ENST00000464362 FANCGO15287 622 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 ATP9BO43861 1147 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 RARAP10276 462 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 MX2P20592 715 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 GCLCP48506 637 aaPredicted RBP9.57□□□□□ -0.88
HPS4-208ENST00000464362 NPY5RQ15761 445 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 TRIM42Q8IWZ5 723 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 AFAP1L2Q8N4X5 818 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 TTC13Q8NBP0 860 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 ZSWIM2Q8NEG5 633 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 ACAP3Q96P50 834 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 RPS6KC1Q96S38 1066 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 MRPL4Q9BYD3 311 aaKnown RBP9.57□□□□□ -0.88
HPS4-208ENST00000464362 ACAD9Q9H845 621 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 AGAP1Q9UPQ3 857 aa9.57□□□□□ -0.88
HPS4-208ENST00000464362 M0QZ92 97 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 CSPG5O95196 566 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 PGM1P36871 562 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 PTENP60484 403 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 EN1Q05925 392 aaPredicted RBP9.56□□□□□ -0.88
HPS4-208ENST00000464362 AP1B1Q10567 949 aa9.56□□□□□ -0.88
HPS4-208ENST00000464362 EMC2Q15006 297 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms