RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ZKSCAN2Q63HK3 967 aa5.61□□□□□ -1.51
ITGB1-208ENST00000464001 SP5Q6BEB4 398 aaPredicted RBP5.61□□□□□ -1.51
ITGB1-208ENST00000464001 PHLDB1Q86UU1 1377 aa5.61□□□□□ -1.51
ITGB1-208ENST00000464001 FAM177A1Q8N128 213 aaPredicted RBP5.61□□□□□ -1.51
ITGB1-208ENST00000464001 PPM1NQ8N819 430 aa5.61□□□□□ -1.51
ITGB1-208ENST00000464001 ACTRT2Q8TDY3 377 aa5.61□□□□□ -1.51
ITGB1-208ENST00000464001 HEPHQ9BQS7 1158 aa5.61□□□□□ -1.51
ITGB1-208ENST00000464001 FOXJ2Q9P0K8 574 aa5.61□□□□□ -1.51
ITGB1-208ENST00000464001 HSFX1Q9UBD0 423 aa5.61□□□□□ -1.51
ITGB1-208ENST00000464001 MCM8Q9UJA3 840 aa5.61□□□□□ -1.51
ITGB1-208ENST00000464001 PEX1O43933 1283 aa5.6□□□□□ -1.51
ITGB1-208ENST00000464001 HAUS5O94927 633 aa5.6□□□□□ -1.51
ITGB1-208ENST00000464001 MTHFD1P11586 935 aaKnown RBP5.6□□□□□ -1.51
ITGB1-208ENST00000464001 GEN1Q17RS7 908 aa5.6□□□□□ -1.51
ITGB1-208ENST00000464001 ZNF362Q5T0B9 420 aaPredicted RBP5.6□□□□□ -1.51
ITGB1-208ENST00000464001 MIGA2Q7L4E1 593 aa5.6□□□□□ -1.51
ITGB1-208ENST00000464001 RSPH3Q86UC2 560 aa5.6□□□□□ -1.51
ITGB1-208ENST00000464001 PDLIM2Q96JY6 352 aa5.6□□□□□ -1.51
ITGB1-208ENST00000464001 SEMA4GQ9NTN9 838 aa5.6□□□□□ -1.51
ITGB1-208ENST00000464001 SLC17A6Q9P2U8 582 aa5.6□□□□□ -1.51
ITGB1-208ENST00000464001 KAT6AQ92794 2004 aa5.6□□□□□ -1.51
ITGB1-208ENST00000464001 SLFN5Q08AF3 891 aa5.59□□□□□ -1.51
ITGB1-208ENST00000464001 PGM2L1Q6PCE3 622 aa5.59□□□□□ -1.51
ITGB1-208ENST00000464001 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.59□□□□□ -1.51
ITGB1-208ENST00000464001 ARHGEF25Q86VW2 580 aa5.59□□□□□ -1.51
ITGB1-208ENST00000464001 SSH3Q8TE77 659 aa5.59□□□□□ -1.51
ITGB1-208ENST00000464001 PUS7LQ9H0K6 701 aaKnown RBP5.59□□□□□ -1.51
ITGB1-208ENST00000464001 TDP1Q9NUW8 608 aa5.59□□□□□ -1.51
ITGB1-208ENST00000464001 SLC5A4Q9NY91 659 aa5.59□□□□□ -1.51
ITGB1-208ENST00000464001 ORC4O43929 436 aa5.58□□□□□ -1.52
ITGB1-208ENST00000464001 CDK4P11802 303 aa5.58□□□□□ -1.52
ITGB1-208ENST00000464001 FCER1AP12319 257 aa5.58□□□□□ -1.52
ITGB1-208ENST00000464001 FOLR3P41439 243 aa5.58□□□□□ -1.52
ITGB1-208ENST00000464001 SLC16A1P53985 500 aa5.58□□□□□ -1.52
ITGB1-208ENST00000464001 CDC42EP1Q00587 391 aa5.58□□□□□ -1.52
ITGB1-208ENST00000464001 PABPC1LQ4VXU2 614 aaKnown RBP5.58□□□□□ -1.52
ITGB1-208ENST00000464001 CNTD1Q8N815 330 aa5.58□□□□□ -1.52
ITGB1-208ENST00000464001 Q8NA96 180 aa5.58□□□□□ -1.52
ITGB1-208ENST00000464001 ZNF384Q8TF68 577 aa5.58□□□□□ -1.52
ITGB1-208ENST00000464001 HDAC10Q969S8 669 aa5.58□□□□□ -1.52
ITGB1-208ENST00000464001 TMX3Q96JJ7 454 aa5.58□□□□□ -1.52
ITGB1-208ENST00000464001 NEU2Q9Y3R4 380 aa5.58□□□□□ -1.52
ITGB1-208ENST00000464001 A0A1W2PS29 197 aa5.57□□□□□ -1.52
ITGB1-208ENST00000464001 GRM6O15303 877 aa5.57□□□□□ -1.52
ITGB1-208ENST00000464001 NDUFS2O75306 463 aa5.57□□□□□ -1.52
ITGB1-208ENST00000464001 ZFPL1O95159 310 aa5.57□□□□□ -1.52
ITGB1-208ENST00000464001 POU3F3P20264 500 aaPredicted RBP5.57□□□□□ -1.52
ITGB1-208ENST00000464001 NHLH1Q02575 133 aa5.57□□□□□ -1.52
ITGB1-208ENST00000464001 FPGSQ05932 587 aa5.57□□□□□ -1.52
ITGB1-208ENST00000464001 ZNF844Q08AG5 666 aa5.57□□□□□ -1.52
ITGB1-208ENST00000464001 SF3B3Q15393 1217 aaKnown RBP5.57□□□□□ -1.52
ITGB1-208ENST00000464001 NECAB2Q7Z6G3 386 aa5.57□□□□□ -1.52
ITGB1-208ENST00000464001 CLNKQ7Z7G1 428 aa5.57□□□□□ -1.52
ITGB1-208ENST00000464001 INTS13Q9NVM9 706 aa5.57□□□□□ -1.52
ITGB1-208ENST00000464001 MKS1Q9NXB0 559 aa5.57□□□□□ -1.52
ITGB1-208ENST00000464001 PCDHA13Q9Y5I0 950 aa5.57□□□□□ -1.52
ITGB1-208ENST00000464001 PRAMEF33A0A0G2JMD5 474 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 CCDC151A5D8V7 595 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 MGST3O14880 152 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 YY2O15391 372 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 SGTAO43765 313 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 PRAMEF10O60809 474 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 PROP1O75360 226 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 AGFG2O95081 481 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 SRGNP10124 158 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 KCNA2P16389 499 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 RPS7P62081 194 aaKnown RBP5.56□□□□□ -1.52
ITGB1-208ENST00000464001 TARDBPQ13148 414 aaKnown RBP eCLIP5.56□□□□□ -1.52
ITGB1-208ENST00000464001 ACAP2Q15057 778 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 UTP14CQ5TAP6 766 aaKnown RBP5.56□□□□□ -1.52
ITGB1-208ENST00000464001 GRASPQ7Z6J2 395 aaPredicted RBP5.56□□□□□ -1.52
ITGB1-208ENST00000464001 DDX42Q86XP3 938 aaKnown RBP eCLIP5.56□□□□□ -1.52
ITGB1-208ENST00000464001 DCBLD1Q8N8Z6 715 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 IL17RDQ8NFM7 739 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 JADE3Q92613 823 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 PACSIN1Q9BY11 444 aa5.56□□□□□ -1.52
ITGB1-208ENST00000464001 FAM126AQ9BYI3 521 aaPredicted RBP5.56□□□□□ -1.52
ITGB1-208ENST00000464001 ARHGEF17Q96PE2 2063 aaPredicted RBP5.55□□□□□ -1.52
ITGB1-208ENST00000464001 MPPED1O15442 326 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 MATN4O95460 622 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 SLC6A4P31645 630 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 RAB39AQ14964 217 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 NBPF8Q3BBV2 869 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 INAVAQ3KP66 663 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 AKNAD1Q5T1N1 836 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 EGFLAMQ63HQ2 1017 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 KAZNQ674X7 775 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 KIAA0895LQ68EN5 471 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 PPP4R3AQ6IN85 833 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 VWA1Q6PCB0 445 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 AOPEPQ8N6M6 819 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 C1orf162Q8NEQ5 155 aaPredicted RBP5.55□□□□□ -1.52
ITGB1-208ENST00000464001 IFI44Q8TCB0 444 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 TMEM125Q96AQ2 219 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 KLK15Q9H2R5 256 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 JKAMPQ9P055 326 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 CDYLQ9Y232 598 aa5.55□□□□□ -1.52
ITGB1-208ENST00000464001 SETD1BQ9UPS6 1966 aaKnown RBP5.55□□□□□ -1.52
ITGB1-208ENST00000464001 KLHL33A6NCF5 533 aa5.54□□□□□ -1.52
ITGB1-208ENST00000464001 RPLP2P05387 115 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms