RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 A0A0B4J269 797 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 K7ENM7 598 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 M0QZQ0 153 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 STK25O00506 426 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 PRRG1O14668 218 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 OGTO15294 1046 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 XPOTO43592 962 aaKnown RBP15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 TRAK2O60296 914 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 GFRA3O60609 400 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 MICAL2O94851 1124 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 LRG1P02750 347 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 KRT18P05783 430 aaKnown RBP15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 RHOP08100 348 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 PTPN2P17706 415 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 RFX1P22670 979 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 MARCKSP29966 332 aaPredicted RBP15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 DDIT3P35638 169 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 AARSP49588 968 aaKnown RBP eCLIP15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 GTF2BQ00403 316 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 PPP2R3AQ06190 1150 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 DHX8Q14562 1220 aaKnown RBP15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 MCM6Q14566 821 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 PDCD11Q14690 1871 aaKnown RBP15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 CD302Q8IX05 232 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 NPAS3Q8IXF0 933 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 LARP4BQ92615 738 aaKnown RBP15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 DDX12PQ92771 950 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 KIF12Q96FN5 646 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 SHDQ96IW2 340 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 RPP25Q9BUL9 199 aaKnown RBP15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 ST6GALNAC4Q9H4F1 302 aa15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 AFF4Q9UHB7 1163 aaKnown RBP15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 MRPS23Q9Y3D9 190 aaKnown RBP15.64■□□□□ 0.09
SNRNP40-203ENST00000463988 VPS37CA5D8V6 355 aaPredicted RBP15.63■□□□□ 0.09
SNRNP40-203ENST00000463988 TBCAO75347 108 aaKnown RBP15.63■□□□□ 0.09
SNRNP40-203ENST00000463988 OAZ2O95190 189 aa15.63■□□□□ 0.09
SNRNP40-203ENST00000463988 PAX3P23760 479 aa15.63■□□□□ 0.09
SNRNP40-203ENST00000463988 STARD6P59095 220 aa15.63■□□□□ 0.09
SNRNP40-203ENST00000463988 GPC5P78333 572 aa15.63■□□□□ 0.09
SNRNP40-203ENST00000463988 PTPAQ15257 358 aa15.63■□□□□ 0.09
SNRNP40-203ENST00000463988 ENOX2Q16206 610 aaKnown RBP15.63■□□□□ 0.09
SNRNP40-203ENST00000463988 MAP4K3Q8IVH8 894 aa15.63■□□□□ 0.09
SNRNP40-203ENST00000463988 FIZ1Q96SL8 496 aa15.63■□□□□ 0.09
SNRNP40-203ENST00000463988 RPF1Q9H9Y2 349 aaKnown RBP15.63■□□□□ 0.09
SNRNP40-203ENST00000463988 CYP4F11Q9HBI6 524 aa15.63■□□□□ 0.09
SNRNP40-203ENST00000463988 GVINP1Q7Z2Y8 2422 aa15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 LACTBL1A8MY62 500 aa15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 ZNF197O14709 1029 aa15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 ECI2O75521 394 aa15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 SEC24AO95486 1093 aa15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 TNFSF9P41273 254 aa15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 ARPP19P56211 112 aa15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 PFKPQ01813 784 aa15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 POU5F1Q01860 360 aaKnown RBP15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 ANGPT1Q15389 498 aa15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 KRI1Q8N9T8 703 aaKnown RBP15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 MSTO1Q9BUK6 570 aa15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 STK17AQ9UEE5 414 aa15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 CPSF3Q9UKF6 684 aaKnown RBP15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 SIT1Q9Y3P8 196 aa15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 SRPRBQ9Y5M8 271 aaKnown RBP15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 INSL5Q9Y5Q6 135 aa15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 MORC2Q9Y6X9 1032 aaPredicted RBP15.62■□□□□ 0.09
SNRNP40-203ENST00000463988 MYO15AQ9UKN7 3530 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 TYMPP19971 482 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 PRKCQQ04759 706 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 YWHAHQ04917 246 aaPredicted RBP15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 SPAG1Q07617 926 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 SLC5A9Q2M3M2 681 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 PRSS36Q5K4E3 855 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 SPATA1Q5VX52 437 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 SLFN12LQ6IEE8 588 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 SLC39A4Q6P5W5 647 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 PIAS4Q8N2W9 510 aaPredicted RBP15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 ELMOD1Q8N336 334 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 LEMD2Q8NC56 503 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 BEST2Q8NFU1 509 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 INTS4Q96HW7 963 aaKnown RBP15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 EPSTI1Q96J88 318 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 DDX23Q9BUQ8 820 aaKnown RBP15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 ZHX3Q9H4I2 956 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 DLGAP2Q9P1A6 1054 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 CCDC39Q9UFE4 941 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 FBXO2Q9UK22 296 aaPredicted RBP15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 DERAQ9Y315 318 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 CLIC4Q9Y696 253 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 STYXL1Q9Y6J8 313 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 WDR87Q6ZQQ6 2873 aa15.61■□□□□ 0.09
SNRNP40-203ENST00000463988 MYH15Q9Y2K3 1946 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 SPTBN4Q9H254 2564 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 PRR23AA6NEV1 266 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 OR6C75A6NL08 312 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 SYT1P21579 422 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 NMT1P30419 496 aaKnown RBP15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 ADCY1Q08828 1119 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 RESTQ13127 1097 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 ZBTB41Q5SVQ8 909 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 CYP4A22Q5TCH4 519 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 IQCEQ6IPM2 695 aa15.6■□□□□ 0.09
SNRNP40-203ENST00000463988 USP37Q86T82 979 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms