RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 FBXO2Q9UK22 296 aaPredicted RBP20.53■□□□□ 0.88
SF3A1-205ENST00000463818 UBQLN1Q9UMX0 589 aaKnown RBP20.53■□□□□ 0.88
SF3A1-205ENST00000463818 PCDHB8Q9UN66 801 aa20.53■□□□□ 0.88
SF3A1-205ENST00000463818 SRPRBQ9Y5M8 271 aaKnown RBP20.53■□□□□ 0.88
SF3A1-205ENST00000463818 CACNA1HO95180 2353 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 TRIP11Q15643 1979 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 A0A0B4J269 797 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 ARHGEF37A1IGU5 675 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 PRRG1O14668 218 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 FAM189A1O60320 539 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 SEC24AO95486 1093 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 ATF2P15336 505 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 PPP2R3AQ06190 1150 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 SLC39A4Q6P5W5 647 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 KRI1Q8N9T8 703 aaKnown RBP20.52■□□□□ 0.88
SF3A1-205ENST00000463818 INTS4Q96HW7 963 aaKnown RBP20.52■□□□□ 0.88
SF3A1-205ENST00000463818 MSTO1Q9BUK6 570 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 CYP4F11Q9HBI6 524 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 FOXD4L1Q9NU39 408 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 CCDC39Q9UFE4 941 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 KCNH3Q9ULD8 1083 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 MRPS23Q9Y3D9 190 aaKnown RBP20.52■□□□□ 0.88
SF3A1-205ENST00000463818 VWA8A3KMH1 1905 aa20.52■□□□□ 0.88
SF3A1-205ENST00000463818 ANKRD63C9JTQ0 380 aa20.51■□□□□ 0.87
SF3A1-205ENST00000463818 LRG1P02750 347 aa20.51■□□□□ 0.87
SF3A1-205ENST00000463818 ADRB2P07550 413 aa20.51■□□□□ 0.87
SF3A1-205ENST00000463818 RHOP08100 348 aa20.51■□□□□ 0.87
SF3A1-205ENST00000463818 PTPN2P17706 415 aa20.51■□□□□ 0.87
SF3A1-205ENST00000463818 GUCY2FP51841 1108 aa20.51■□□□□ 0.87
SF3A1-205ENST00000463818 ZC2HC1CQ53FD0 456 aaPredicted RBP20.51■□□□□ 0.87
SF3A1-205ENST00000463818 RRAGBQ5VZM2 374 aa20.51■□□□□ 0.87
SF3A1-205ENST00000463818 TPGS2Q68CL5 300 aa20.51■□□□□ 0.87
SF3A1-205ENST00000463818 ZNF280DQ6N043 979 aa20.51■□□□□ 0.87
SF3A1-205ENST00000463818 DYMQ7RTS9 669 aa20.51■□□□□ 0.87
SF3A1-205ENST00000463818 TCEAL8Q8IYN2 117 aa20.51■□□□□ 0.87
SF3A1-205ENST00000463818 FAM212AQ96EL1 285 aa20.51■□□□□ 0.87
SF3A1-205ENST00000463818 SLC2A4RGQ9NR83 387 aa20.51■□□□□ 0.87
SF3A1-205ENST00000463818 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.51■□□□□ 0.87
SF3A1-205ENST00000463818 KMT2EQ8IZD2 1858 aa20.51■□□□□ 0.87
SF3A1-205ENST00000463818 M0QZQ0 153 aa20.5■□□□□ 0.87
SF3A1-205ENST00000463818 ABCD1P33897 745 aa20.5■□□□□ 0.87
SF3A1-205ENST00000463818 GPC5P78333 572 aa20.5■□□□□ 0.87
SF3A1-205ENST00000463818 MTSS1LQ765P7 747 aa20.5■□□□□ 0.87
SF3A1-205ENST00000463818 MAP4K3Q8IVH8 894 aa20.5■□□□□ 0.87
SF3A1-205ENST00000463818 NPAS3Q8IXF0 933 aa20.5■□□□□ 0.87
SF3A1-205ENST00000463818 ING5Q8WYH8 240 aa20.5■□□□□ 0.87
SF3A1-205ENST00000463818 MCRS1Q96EZ8 462 aa20.5■□□□□ 0.87
SF3A1-205ENST00000463818 TSPAN18Q96SJ8 248 aa20.5■□□□□ 0.87
SF3A1-205ENST00000463818 ST6GALNAC4Q9H4F1 302 aa20.5■□□□□ 0.87
SF3A1-205ENST00000463818 STK17AQ9UEE5 414 aa20.5■□□□□ 0.87
SF3A1-205ENST00000463818 CPSF3Q9UKF6 684 aaKnown RBP20.5■□□□□ 0.87
SF3A1-205ENST00000463818 MTMR6Q9Y217 621 aa20.5■□□□□ 0.87
SF3A1-205ENST00000463818 TIMM13Q9Y5L4 95 aaPredicted RBP20.5■□□□□ 0.87
SF3A1-205ENST00000463818 DOCK6Q96HP0 2047 aa20.49■□□□□ 0.87
SF3A1-205ENST00000463818 DOCK8Q8NF50 2099 aa20.49■□□□□ 0.87
SF3A1-205ENST00000463818 XPOTO43592 962 aaKnown RBP20.49■□□□□ 0.87
SF3A1-205ENST00000463818 RFX1P22670 979 aa20.49■□□□□ 0.87
SF3A1-205ENST00000463818 ADCY1Q08828 1119 aa20.49■□□□□ 0.87
SF3A1-205ENST00000463818 SPATA1Q5VX52 437 aa20.49■□□□□ 0.87
SF3A1-205ENST00000463818 DSTYKQ6XUX3 929 aa20.49■□□□□ 0.87
SF3A1-205ENST00000463818 ZNF720Q7Z2F6 126 aa20.49■□□□□ 0.87
SF3A1-205ENST00000463818 CD302Q8IX05 232 aa20.49■□□□□ 0.87
SF3A1-205ENST00000463818 DTWD2Q8NBA8 298 aa20.49■□□□□ 0.87
SF3A1-205ENST00000463818 PANK2Q9BZ23 570 aa20.49■□□□□ 0.87
SF3A1-205ENST00000463818 TBC1D17Q9HA65 648 aa20.49■□□□□ 0.87
SF3A1-205ENST00000463818 AVENQ9NQS1 362 aaPredicted RBP20.49■□□□□ 0.87
SF3A1-205ENST00000463818 AFF4Q9UHB7 1163 aaKnown RBP20.49■□□□□ 0.87
SF3A1-205ENST00000463818 TISP43B9A030 160 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 PPEF2O14830 753 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 OAZ2O95190 189 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 SLC39A14Q15043 492 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 SLC5A9Q2M3M2 681 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 ADALQ6DHV7 355 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 JADE1Q6IE81 842 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 SV2BQ7L1I2 683 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 SFR1Q86XK3 245 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 CCDC105Q8IYK2 499 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 BEST2Q8NFU1 509 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 USP28Q96RU2 1077 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 CORO1BQ9BR76 489 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 ARHGEF3Q9NR81 526 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 GDE1Q9NZC3 331 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 MAFFQ9ULX9 164 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 INSL5Q9Y5Q6 135 aa20.48■□□□□ 0.87
SF3A1-205ENST00000463818 MYMKA6NI61 221 aa20.47■□□□□ 0.87
SF3A1-205ENST00000463818 CPB1P15086 417 aa20.47■□□□□ 0.87
SF3A1-205ENST00000463818 TXLNAP40222 546 aa20.47■□□□□ 0.87
SF3A1-205ENST00000463818 AARSP49588 968 aaKnown RBP eCLIP20.47■□□□□ 0.87
SF3A1-205ENST00000463818 ACOT2P49753 483 aa20.47■□□□□ 0.87
SF3A1-205ENST00000463818 YWHAHQ04917 246 aaPredicted RBP20.47■□□□□ 0.87
SF3A1-205ENST00000463818 SLFN12LQ6IEE8 588 aa20.47■□□□□ 0.87
SF3A1-205ENST00000463818 PHLDB3Q6NSJ2 640 aa20.47■□□□□ 0.87
SF3A1-205ENST00000463818 POTEHQ6S545 545 aa20.47■□□□□ 0.87
SF3A1-205ENST00000463818 RNF19BQ6ZMZ0 732 aa20.47■□□□□ 0.87
SF3A1-205ENST00000463818 USP37Q86T82 979 aa20.47■□□□□ 0.87
SF3A1-205ENST00000463818 KXD1Q9BQD3 176 aa20.47■□□□□ 0.87
SF3A1-205ENST00000463818 ZSCAN16Q9H4T2 348 aaPredicted RBP20.47■□□□□ 0.87
SF3A1-205ENST00000463818 STYXL1Q9Y6J8 313 aa20.47■□□□□ 0.87
SF3A1-205ENST00000463818 K7ELQ4 463 aaPredicted RBP20.46■□□□□ 0.87
SF3A1-205ENST00000463818 STX6O43752 255 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms