RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 MCRS1Q96EZ8 462 aa8.56□□□□□ -1.04
SMC3-202ENST00000462899 LXNQ9BS40 222 aa8.56□□□□□ -1.04
SMC3-202ENST00000462899 APOL6Q9BWW8 343 aa8.56□□□□□ -1.04
SMC3-202ENST00000462899 LSM14BQ9BX40 385 aaKnown RBP8.56□□□□□ -1.04
SMC3-202ENST00000462899 RNF26Q9BY78 433 aaPredicted RBP8.56□□□□□ -1.04
SMC3-202ENST00000462899 AGXT2Q9BYV1 514 aa8.56□□□□□ -1.04
SMC3-202ENST00000462899 LMAN1LQ9HAT1 526 aa8.56□□□□□ -1.04
SMC3-202ENST00000462899 TRPV4Q9HBA0 871 aa8.56□□□□□ -1.04
SMC3-202ENST00000462899 SH3GLB2Q9NR46 395 aa8.56□□□□□ -1.04
SMC3-202ENST00000462899 KLK14Q9P0G3 267 aa8.56□□□□□ -1.04
SMC3-202ENST00000462899 VPS54Q9P1Q0 977 aa8.56□□□□□ -1.04
SMC3-202ENST00000462899 ZMIZ1Q9ULJ6 1067 aa8.56□□□□□ -1.04
SMC3-202ENST00000462899 POLIQ9UNA4 740 aa8.56□□□□□ -1.04
SMC3-202ENST00000462899 MRPS23Q9Y3D9 190 aaKnown RBP8.56□□□□□ -1.04
SMC3-202ENST00000462899 PIAS3Q9Y6X2 628 aa8.56□□□□□ -1.04
SMC3-202ENST00000462899 TSC2P49815 1807 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 ADAMTS20P59510 1910 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 CCDC196A0A1B0GTZ2 297 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 WDR27A2RRH5 827 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 ZBTB39O15060 712 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 ABLIM3O94929 683 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 EPN2O95208 641 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 KCNK5O95279 499 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 NPTXRO95502 500 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 ZNF806P0C7X5 589 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 IFNAR1P17181 557 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 YWHABP31946 246 aaKnown RBP8.55□□□□□ -1.04
SMC3-202ENST00000462899 OR1D2P34982 312 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 ARL2P36404 184 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 ELAVL2Q12926 359 aaKnown RBP8.55□□□□□ -1.04
SMC3-202ENST00000462899 MXD4Q14582 209 aaPredicted RBP8.55□□□□□ -1.04
SMC3-202ENST00000462899 SF3A2Q15428 464 aaKnown RBP8.55□□□□□ -1.04
SMC3-202ENST00000462899 UNQ6494/PRO21346Q6UXR6 183 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 Q6ZS52 159 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 WDR5BQ86VZ2 330 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 CDR2LQ86X02 465 aaPredicted RBP8.55□□□□□ -1.04
SMC3-202ENST00000462899 DAGLBQ8NCG7 672 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 HAS1Q92839 578 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 IRF7Q92985 503 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 TRMT61BQ9BVS5 477 aaKnown RBP8.55□□□□□ -1.04
SMC3-202ENST00000462899 KDM4CQ9H3R0 1056 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 BRD9Q9H8M2 597 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 BACE2Q9Y5Z0 518 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 CDY1Q9Y6F8 540 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 ANK1P16157 1881 aa8.55□□□□□ -1.04
SMC3-202ENST00000462899 CACNA1EQ15878 2313 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 KALRNO60229 2985 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 INO80B-WBP1J3KQ70 363 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 DKC1O60832 514 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMC3-202ENST00000462899 PSMC3P17980 439 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 GLRA2P23416 452 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 RBM25P49756 843 aaKnown RBP8.54□□□□□ -1.04
SMC3-202ENST00000462899 EPHA5P54756 1037 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 ROR1Q01973 937 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 CCINQ13939 588 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 STPG1Q5TH74 334 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 CDCA2Q69YH5 1023 aaPredicted RBP8.54□□□□□ -1.04
SMC3-202ENST00000462899 IL31Q6EBC2 164 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 SLC8B1Q6J4K2 584 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 TXNDC11Q6PKC3 985 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 CEP57Q86XR8 500 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 HACE1Q8IYU2 909 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 C3orf58Q8NDZ4 430 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 DEPDC1BQ8WUY9 529 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 GATA6Q92908 595 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 RSPRY1Q96DX4 576 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 MSANTD3Q96H12 275 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 LOXL4Q96JB6 756 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 ZSWIM3Q96MP5 696 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 C22orf23Q9BZE7 217 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 TRIM6Q9C030 488 aaPredicted RBP8.54□□□□□ -1.04
SMC3-202ENST00000462899 ZFP14Q9HCL3 533 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 ANO2Q9NQ90 1003 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 PCDHA4Q9UN74 947 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 PI4KAP42356 2102 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 ABCA7Q8IZY2 2146 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 PLXND1Q9Y4D7 1925 aa8.54□□□□□ -1.04
SMC3-202ENST00000462899 ZNF638Q14966 1978 aaKnown RBP8.53□□□□□ -1.04
SMC3-202ENST00000462899 MYBPHLA2RUH7 354 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 RECQL4O94761 1208 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 LYPLA2O95372 231 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 EDN1P05305 212 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 THP07101 528 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 PTPN2P17706 415 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 CCNE1P24864 410 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 TKTP29401 623 aaKnown RBP8.53□□□□□ -1.04
SMC3-202ENST00000462899 GDI1P31150 447 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 EVCP57679 992 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 FCHO2Q0JRZ9 810 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 EPHA7Q15375 998 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 FAM187BQ17R55 369 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 AASDHQ4L235 1098 aaPredicted RBP8.53□□□□□ -1.04
SMC3-202ENST00000462899 RNF20Q5VTR2 975 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 MFSD6LQ8IWD5 586 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 TCEAL8Q8IYN2 117 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 ZNF461Q8TAF7 563 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 SMARCD2Q92925 531 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 KCNB2Q92953 911 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 PRIMPOLQ96LW4 560 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 FAM20AQ96MK3 541 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms