RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 C12orf56Q8IXR9 622 aa17.18■□□□□ 0.34
ERCC3-206ENST00000462306 CCDC47Q96A33 483 aaKnown RBP17.18■□□□□ 0.34
ERCC3-206ENST00000462306 CCDC34Q96HJ3 373 aa17.18■□□□□ 0.34
ERCC3-206ENST00000462306 SUSD3Q96L08 255 aa17.18■□□□□ 0.34
ERCC3-206ENST00000462306 CLSTN3Q9BQT9 956 aa17.18■□□□□ 0.34
ERCC3-206ENST00000462306 KCTD10Q9H3F6 313 aa17.18■□□□□ 0.34
ERCC3-206ENST00000462306 CGNQ9P2M7 1197 aaKnown RBP17.18■□□□□ 0.34
ERCC3-206ENST00000462306 TCF20Q9UGU0 1960 aaKnown RBP17.17■□□□□ 0.34
ERCC3-206ENST00000462306 ZNF233A6NK53 670 aa17.17■□□□□ 0.34
ERCC3-206ENST00000462306 PIRO00625 290 aa17.17■□□□□ 0.34
ERCC3-206ENST00000462306 C1RP00736 705 aa17.17■□□□□ 0.34
ERCC3-206ENST00000462306 MCM4P33991 863 aa17.17■□□□□ 0.34
ERCC3-206ENST00000462306 AARSP49588 968 aaKnown RBP eCLIP17.17■□□□□ 0.34
ERCC3-206ENST00000462306 SMAD2Q15796 467 aaKnown RBP17.17■□□□□ 0.34
ERCC3-206ENST00000462306 C9orf57Q5W0N0 161 aa17.17■□□□□ 0.34
ERCC3-206ENST00000462306 PDXDC1Q6P996 788 aa17.17■□□□□ 0.34
ERCC3-206ENST00000462306 LILRA6Q6PI73 481 aa17.17■□□□□ 0.34
ERCC3-206ENST00000462306 NOC3LQ8WTT2 800 aaKnown RBP17.17■□□□□ 0.34
ERCC3-206ENST00000462306 TTC28Q96AY4 2481 aa17.17■□□□□ 0.34
ERCC3-206ENST00000462306 KIAA1586Q9HCI6 787 aa17.17■□□□□ 0.34
ERCC3-206ENST00000462306 PDE11AQ9HCR9 933 aa17.17■□□□□ 0.34
ERCC3-206ENST00000462306 DZANK1Q9NVP4 752 aa17.17■□□□□ 0.34
ERCC3-206ENST00000462306 DPP3Q9NY33 737 aa17.17■□□□□ 0.34
ERCC3-206ENST00000462306 MTRRQ9UBK8 725 aa17.17■□□□□ 0.34
ERCC3-206ENST00000462306 M0QZQ0 153 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 SYN3O14994 580 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 ADAM12O43184 909 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 CYP2J2P51589 502 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 MRPL58Q14197 206 aaKnown RBP17.16■□□□□ 0.34
ERCC3-206ENST00000462306 RSPO2Q6UXX9 243 aaPredicted RBP17.16■□□□□ 0.34
ERCC3-206ENST00000462306 PALB2Q86YC2 1186 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 GLYCTKQ8IVS8 523 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 ELOA2Q8IYF1 753 aaPredicted RBP17.16■□□□□ 0.34
ERCC3-206ENST00000462306 XXYLT1Q8NBI6 393 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 SPATA20Q8TB22 786 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 GOLGA5Q8TBA6 731 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 TMEM174Q8WUU8 243 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 SUSD6Q92537 303 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 FAM84AQ96KN4 292 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 NECAB3Q96P71 396 aaPredicted RBP17.16■□□□□ 0.34
ERCC3-206ENST00000462306 APOL5Q9BWW9 433 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 FAM50BQ9Y247 325 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 USP15Q9Y4E8 981 aaPredicted RBP17.16■□□□□ 0.34
ERCC3-206ENST00000462306 BACE2Q9Y5Z0 518 aa17.16■□□□□ 0.34
ERCC3-206ENST00000462306 PDXKO00764 312 aa17.15■□□□□ 0.34
ERCC3-206ENST00000462306 SPTLC1O15269 473 aa17.15■□□□□ 0.34
ERCC3-206ENST00000462306 TGM5O43548 720 aa17.15■□□□□ 0.34
ERCC3-206ENST00000462306 TBC1D4O60343 1298 aa17.15■□□□□ 0.34
ERCC3-206ENST00000462306 GLUD1P00367 558 aa17.15■□□□□ 0.34
ERCC3-206ENST00000462306 LILRA4P59901 499 aa17.15■□□□□ 0.34
ERCC3-206ENST00000462306 SNRNP35Q16560 246 aaKnown RBP17.15■□□□□ 0.34
ERCC3-206ENST00000462306 VARS2Q5ST30 1063 aaKnown RBP17.15■□□□□ 0.34
ERCC3-206ENST00000462306 ANKS3Q6ZW76 656 aa17.15■□□□□ 0.34
ERCC3-206ENST00000462306 C12orf76Q8N812 135 aaPredicted RBP17.15■□□□□ 0.34
ERCC3-206ENST00000462306 RDH13Q8NBN7 331 aa17.15■□□□□ 0.34
ERCC3-206ENST00000462306 CXorf38Q8TB03 319 aa17.15■□□□□ 0.34
ERCC3-206ENST00000462306 ERCC4Q92889 916 aaPredicted RBP17.15■□□□□ 0.34
ERCC3-206ENST00000462306 IPO9Q96P70 1041 aaKnown RBP17.15■□□□□ 0.34
ERCC3-206ENST00000462306 UHRF1Q96T88 793 aaPredicted RBP17.15■□□□□ 0.34
ERCC3-206ENST00000462306 TSHZ2Q9NRE2 1034 aa17.15■□□□□ 0.34
ERCC3-206ENST00000462306 DMAC2Q9NW81 257 aa17.15■□□□□ 0.34
ERCC3-206ENST00000462306 PCDHB8Q9UN66 801 aa17.15■□□□□ 0.34
ERCC3-206ENST00000462306 PCDHA5Q9Y5H7 936 aa17.15■□□□□ 0.34
ERCC3-206ENST00000462306 PLXNA3P51805 1871 aa17.15■□□□□ 0.34
ERCC3-206ENST00000462306 SPATA31D3P0C874 917 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 OR1D2P34982 312 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 UBE2HP62256 183 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 TFAMQ00059 246 aaKnown RBP17.14■□□□□ 0.33
ERCC3-206ENST00000462306 ITIH3Q06033 890 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 RAB33AQ14088 237 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 SCARA3Q6AZY7 606 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 CLEC17AQ6ZS10 378 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 SPATA31D4Q6ZUB0 917 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 SLC9A9Q8IVB4 645 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 GUF1Q8N442 669 aaKnown RBP17.14■□□□□ 0.33
ERCC3-206ENST00000462306 C1orf127Q8N9H9 656 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 FEZF2Q8TBJ5 459 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 HDAC7Q8WUI4 952 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 CACTINQ8WUQ7 758 aaKnown RBP17.14■□□□□ 0.33
ERCC3-206ENST00000462306 GSDMAQ96QA5 445 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 GZF1Q9H116 711 aaPredicted RBP17.14■□□□□ 0.33
ERCC3-206ENST00000462306 ADAM7Q9H2U9 754 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 MAN1C1Q9NR34 630 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 INTS13Q9NVM9 706 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 CDH22Q9UJ99 828 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 MAPK8IP1Q9UQF2 711 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 TRAF3IP3Q9Y228 551 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 PTPRJQ12913 1337 aa17.14■□□□□ 0.33
ERCC3-206ENST00000462306 KINO60870 393 aaKnown RBP17.13■□□□□ 0.33
ERCC3-206ENST00000462306 KIF20AO95235 890 aa17.13■□□□□ 0.33
ERCC3-206ENST00000462306 SMC2O95347 1197 aa17.13■□□□□ 0.33
ERCC3-206ENST00000462306 PAX3P23760 479 aa17.13■□□□□ 0.33
ERCC3-206ENST00000462306 CYP24A1Q07973 514 aa17.13■□□□□ 0.33
ERCC3-206ENST00000462306 PSMD6Q15008 389 aa17.13■□□□□ 0.33
ERCC3-206ENST00000462306 SURF1Q15526 300 aa17.13■□□□□ 0.33
ERCC3-206ENST00000462306 RARS2Q5T160 578 aaKnown RBP17.13■□□□□ 0.33
ERCC3-206ENST00000462306 LMBRD2Q68DH5 695 aaPredicted RBP17.13■□□□□ 0.33
ERCC3-206ENST00000462306 SLC8B1Q6J4K2 584 aa17.13■□□□□ 0.33
ERCC3-206ENST00000462306 SMYD4Q8IYR2 804 aaPredicted RBP17.13■□□□□ 0.33
ERCC3-206ENST00000462306 APPL2Q8NEU8 664 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms