RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 SLITRK6Q9H5Y7 841 aa16.82■□□□□ 0.28
APP-211ENST00000462267 ANKEF1Q9NU02 776 aa16.82■□□□□ 0.28
APP-211ENST00000462267 LRRIQ4A6NIV6 560 aa16.81■□□□□ 0.28
APP-211ENST00000462267 H7C4K7 107 aa16.81■□□□□ 0.28
APP-211ENST00000462267 I3L4J1 428 aa16.81■□□□□ 0.28
APP-211ENST00000462267 MARCH6O60337 910 aa16.81■□□□□ 0.28
APP-211ENST00000462267 SLITRK3O94933 977 aa16.81■□□□□ 0.28
APP-211ENST00000462267 LYPLA2O95372 231 aa16.81■□□□□ 0.28
APP-211ENST00000462267 GJA1P17302 382 aa16.81■□□□□ 0.28
APP-211ENST00000462267 CSRP1P21291 193 aaKnown RBP16.81■□□□□ 0.28
APP-211ENST00000462267 PXNP49023 591 aaPredicted RBP16.81■□□□□ 0.28
APP-211ENST00000462267 ARPP19P56211 112 aa16.81■□□□□ 0.28
APP-211ENST00000462267 PON2Q15165 354 aa16.81■□□□□ 0.28
APP-211ENST00000462267 TEAD2Q15562 447 aa16.81■□□□□ 0.28
APP-211ENST00000462267 NCAPH2Q6IBW4 605 aa16.81■□□□□ 0.28
APP-211ENST00000462267 TCEAL6Q6IPX3 200 aa16.81■□□□□ 0.28
APP-211ENST00000462267 KRT25Q7Z3Z0 450 aa16.81■□□□□ 0.28
APP-211ENST00000462267 TRIM22Q8IYM9 498 aa16.81■□□□□ 0.28
APP-211ENST00000462267 FAM177A1Q8N128 213 aaPredicted RBP16.81■□□□□ 0.28
APP-211ENST00000462267 TCEAL3Q969E4 200 aa16.81■□□□□ 0.28
APP-211ENST00000462267 RSPRY1Q96DX4 576 aa16.81■□□□□ 0.28
APP-211ENST00000462267 PPP1R10Q96QC0 940 aaKnown RBP16.81■□□□□ 0.28
APP-211ENST00000462267 SCNM1Q9BWG6 230 aa16.81■□□□□ 0.28
APP-211ENST00000462267 POLR3FQ9H1D9 316 aaPredicted RBP16.81■□□□□ 0.28
APP-211ENST00000462267 CEP72Q9P209 647 aa16.81■□□□□ 0.28
APP-211ENST00000462267 LAMA1P25391 3075 aa16.81■□□□□ 0.28
APP-211ENST00000462267 SETXQ7Z333 2677 aaKnown RBP16.81■□□□□ 0.28
APP-211ENST00000462267 ARID2Q68CP9 1835 aa16.8■□□□□ 0.28
APP-211ENST00000462267 TAF4O00268 1085 aa16.8■□□□□ 0.28
APP-211ENST00000462267 SYN3O14994 580 aa16.8■□□□□ 0.28
APP-211ENST00000462267 ATG13O75143 517 aa16.8■□□□□ 0.28
APP-211ENST00000462267 BRCC3P46736 316 aa16.8■□□□□ 0.28
APP-211ENST00000462267 TWF1Q12792 350 aa16.8■□□□□ 0.28
APP-211ENST00000462267 TMEM132AQ24JP5 1023 aa16.8■□□□□ 0.28
APP-211ENST00000462267 PLK5Q496M5 336 aa16.8■□□□□ 0.28
APP-211ENST00000462267 ARHGAP29Q52LW3 1261 aa16.8■□□□□ 0.28
APP-211ENST00000462267 CDCA2Q69YH5 1023 aaPredicted RBP16.8■□□□□ 0.28
APP-211ENST00000462267 HAUS6Q7Z4H7 955 aa16.8■□□□□ 0.28
APP-211ENST00000462267 NOSTRINQ8IVI9 506 aa16.8■□□□□ 0.28
APP-211ENST00000462267 ZBTB8OSQ8IWT0 167 aa16.8■□□□□ 0.28
APP-211ENST00000462267 C3orf58Q8NDZ4 430 aa16.8■□□□□ 0.28
APP-211ENST00000462267 HAS1Q92839 578 aa16.8■□□□□ 0.28
APP-211ENST00000462267 CCDC43Q96MW1 224 aaKnown RBP16.8■□□□□ 0.28
APP-211ENST00000462267 SLC8A2Q9UPR5 921 aa16.8■□□□□ 0.28
APP-211ENST00000462267 GDAQ9Y2T3 454 aa16.8■□□□□ 0.28
APP-211ENST00000462267 DMXL2Q8TDJ6 3036 aa16.79■□□□□ 0.28
APP-211ENST00000462267 TOP3BO95985 862 aaKnown RBP16.79■□□□□ 0.28
APP-211ENST00000462267 PRKCBP05771 671 aa16.79■□□□□ 0.28
APP-211ENST00000462267 PRPF4BQ13523 1007 aaKnown RBP16.79■□□□□ 0.28
APP-211ENST00000462267 ELF2Q15723 593 aa16.79■□□□□ 0.28
APP-211ENST00000462267 NPY5RQ15761 445 aa16.79■□□□□ 0.28
APP-211ENST00000462267 NEK8Q86SG6 692 aa16.79■□□□□ 0.28
APP-211ENST00000462267 FBXL16Q8N461 479 aa16.79■□□□□ 0.28
APP-211ENST00000462267 CAMKK1Q8N5S9 505 aa16.79■□□□□ 0.28
APP-211ENST00000462267 SHKBP1Q8TBC3 707 aa16.79■□□□□ 0.28
APP-211ENST00000462267 NAP1L4Q99733 375 aaKnown RBP16.79■□□□□ 0.28
APP-211ENST00000462267 GTSE1Q9NYZ3 720 aa16.79■□□□□ 0.28
APP-211ENST00000462267 AFF4Q9UHB7 1163 aaKnown RBP16.79■□□□□ 0.28
APP-211ENST00000462267 FBXL5Q9UKA1 691 aa16.79■□□□□ 0.28
APP-211ENST00000462267 PDCD11Q14690 1871 aaKnown RBP16.79■□□□□ 0.28
APP-211ENST00000462267 AKAP13Q12802 2813 aa16.78■□□□□ 0.28
APP-211ENST00000462267 TTLL13PA6NNM8 815 aa16.78■□□□□ 0.28
APP-211ENST00000462267 RHOBTB1O94844 696 aa16.78■□□□□ 0.28
APP-211ENST00000462267 CAVIN2O95810 425 aa16.78■□□□□ 0.28
APP-211ENST00000462267 RARRES1P49788 294 aa16.78■□□□□ 0.28
APP-211ENST00000462267 MRPL58Q14197 206 aaKnown RBP16.78■□□□□ 0.28
APP-211ENST00000462267 MAPK6Q16659 721 aa16.78■□□□□ 0.28
APP-211ENST00000462267 DCAF4L1Q3SXM0 396 aa16.78■□□□□ 0.28
APP-211ENST00000462267 GLRA4Q5JXX5 417 aa16.78■□□□□ 0.28
APP-211ENST00000462267 ARID3BQ8IVW6 561 aaPredicted RBP16.78■□□□□ 0.28
APP-211ENST00000462267 SLFN12Q8IYM2 578 aa16.78■□□□□ 0.28
APP-211ENST00000462267 TTC8Q8TAM2 541 aa16.78■□□□□ 0.28
APP-211ENST00000462267 KIF12Q96FN5 646 aa16.78■□□□□ 0.28
APP-211ENST00000462267 HSD17B14Q9BPX1 270 aa16.78■□□□□ 0.28
APP-211ENST00000462267 EIF2AK1Q9BQI3 630 aaKnown RBP16.78■□□□□ 0.28
APP-211ENST00000462267 DUSP15Q9H1R2 295 aaPredicted RBP16.78■□□□□ 0.28
APP-211ENST00000462267 C2orf40Q9H1Z8 148 aa16.78■□□□□ 0.28
APP-211ENST00000462267 NEUROG3Q9Y4Z2 214 aa16.78■□□□□ 0.28
APP-211ENST00000462267 NBEAQ8NFP9 2946 aa16.77■□□□□ 0.28
APP-211ENST00000462267 CCDC194A0A1B0GVG4 234 aa16.77■□□□□ 0.28
APP-211ENST00000462267 BCLAF3A2AJT9 711 aaKnown RBP16.77■□□□□ 0.28
APP-211ENST00000462267 ACKR2O00590 384 aa16.77■□□□□ 0.28
APP-211ENST00000462267 DPYSL4O14531 572 aa16.77■□□□□ 0.28
APP-211ENST00000462267 CCNT1O60563 726 aaKnown RBP16.77■□□□□ 0.28
APP-211ENST00000462267 CPA1P15085 419 aa16.77■□□□□ 0.28
APP-211ENST00000462267 PLCB2Q00722 1185 aa16.77■□□□□ 0.28
APP-211ENST00000462267 CREB5Q02930 508 aa16.77■□□□□ 0.28
APP-211ENST00000462267 SSRP1Q08945 709 aaKnown RBP16.77■□□□□ 0.28
APP-211ENST00000462267 CTXN3Q4LDR2 81 aa16.77■□□□□ 0.28
APP-211ENST00000462267 PKN3Q6P5Z2 889 aa16.77■□□□□ 0.28
APP-211ENST00000462267 TMEM209Q96SK2 561 aa16.77■□□□□ 0.28
APP-211ENST00000462267 AGXT2Q9BYV1 514 aa16.77■□□□□ 0.28
APP-211ENST00000462267 GOLGA2P5Q9HBQ8 144 aa16.77■□□□□ 0.28
APP-211ENST00000462267 OBP2AQ9NY56 170 aa16.77■□□□□ 0.28
APP-211ENST00000462267 GCN1Q92616 2671 aaKnown RBP16.76■□□□□ 0.27
APP-211ENST00000462267 FLNBO75369 2602 aaKnown RBP16.76■□□□□ 0.27
APP-211ENST00000462267 LNP1A1A4G5 178 aa16.76■□□□□ 0.27
APP-211ENST00000462267 DEXIO95424 95 aa16.76■□□□□ 0.27
APP-211ENST00000462267 BAG4O95429 457 aaKnown RBP16.76■□□□□ 0.27
APP-211ENST00000462267 XRCC6P12956 609 aaKnown RBP eCLIP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms