RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 CAPN7Q9Y6W3 813 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 ZSWIM8A7E2V4 1837 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 MGAMO43451 1857 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 K7ERI5 159 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 C22orf31O95567 290 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 GCLMP48507 274 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 GTF2A1P52655 376 aaPredicted RBP13.31□□□□□ -0.28
COL4A6-204ENST00000461897 DR1Q01658 176 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 SREBF2Q12772 1141 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 CCL14Q16627 93 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 PRAMEF19Q5SWL8 479 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 HOOK3Q86VS8 718 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 EXOC8Q8IYI6 725 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 GPD1LQ8N335 351 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 TCP11Q8WWU5 503 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 PSPC1Q8WXF1 523 aaKnown RBP13.31□□□□□ -0.28
COL4A6-204ENST00000461897 PGM2Q96G03 612 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 CABS1Q96KC9 395 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 MFSD14AQ96MC6 490 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 RPS6KC1Q96S38 1066 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 AGPAT1Q99943 283 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 TMEM109Q9BVC6 243 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 CCDC113Q9H0I3 377 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 ZFYVE28Q9HCC9 887 aa13.31□□□□□ -0.28
COL4A6-204ENST00000461897 DDX20Q9UHI6 824 aaKnown RBP13.31□□□□□ -0.28
COL4A6-204ENST00000461897 TTLL13PA6NNM8 815 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 GJB1P08034 283 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 MMP3P08254 477 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 INSRRP14616 1297 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 CTGFP29279 349 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 CLCN3P51790 818 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 CYP24A1Q07973 514 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 BYSLQ13895 437 aaKnown RBP13.3□□□□□ -0.28
COL4A6-204ENST00000461897 MXD4Q14582 209 aaPredicted RBP13.3□□□□□ -0.28
COL4A6-204ENST00000461897 PTPROQ16827 1216 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 KRT71Q3SY84 523 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 EPC2Q52LR7 807 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 LACTB2Q53H82 288 aaPredicted RBP13.3□□□□□ -0.28
COL4A6-204ENST00000461897 FBXW10Q5XX13 1052 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 IQSEC1Q6DN90 963 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 PHLDB3Q6NSJ2 640 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 ZDHHC24Q6UX98 284 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 CROCCP2Q86T23 111 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 OR6J1Q8NGC5 347 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 PARD3BQ8TEW8 1205 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 RAPGEF5Q92565 580 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 ALG3Q92685 438 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 TATDN2Q93075 761 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 JPH2Q9BR39 696 aaPredicted RBP13.3□□□□□ -0.28
COL4A6-204ENST00000461897 TRIM51Q9BSJ1 452 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 TARS2Q9BW92 718 aaKnown RBP13.3□□□□□ -0.28
COL4A6-204ENST00000461897 FAM129AQ9BZQ8 928 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 THAP2Q9H0W7 228 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 PABPC3Q9H361 631 aaKnown RBP13.3□□□□□ -0.28
COL4A6-204ENST00000461897 PCYOX1Q9UHG3 505 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 NOVA2Q9UNW9 492 aaKnown RBP13.3□□□□□ -0.28
COL4A6-204ENST00000461897 COG5Q9UP83 839 aa13.3□□□□□ -0.28
COL4A6-204ENST00000461897 KIAA0391O15091 583 aaKnown RBP13.29□□□□□ -0.28
COL4A6-204ENST00000461897 PHF2O75151 1096 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 LRRN2O75325 713 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 ZNF865P0CJ78 1059 aaPredicted RBP13.29□□□□□ -0.28
COL4A6-204ENST00000461897 CTNNA2P26232 953 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 CHRNA3P32297 505 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 PTGIRP43119 386 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 TM4SF4P48230 202 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 MXI1P50539 228 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 MAGOHP61326 146 aaKnown RBP13.29□□□□□ -0.28
COL4A6-204ENST00000461897 IGBP1P78318 339 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 ZNF484Q5JVG2 852 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 ERMARDQ5T6L9 678 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 JAMLQ86YT9 394 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 RNF149Q8NC42 400 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 SMC1BQ8NDV3 1235 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 MAGOHBQ96A72 148 aaKnown RBP13.29□□□□□ -0.28
COL4A6-204ENST00000461897 CCDC127Q96BQ5 260 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 ZBTB45Q96K62 511 aaPredicted RBP13.29□□□□□ -0.28
COL4A6-204ENST00000461897 FAM213AQ9BRX8 229 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 TMEM117Q9H0C3 514 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 DPH5Q9H2P9 285 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 PPANQ9NQ55 473 aaKnown RBP13.29□□□□□ -0.28
COL4A6-204ENST00000461897 RASAL2Q9UJF2 1139 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 GJD2Q9UKL4 321 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 GNEQ9Y223 722 aaKnown RBP13.29□□□□□ -0.28
COL4A6-204ENST00000461897 ALG6Q9Y672 507 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 HTTP42858 3142 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 TMEM88BA6NKF7 163 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 H3BRB1 525 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 FOXN3O00409 490 aaPredicted RBP13.29□□□□□ -0.28
COL4A6-204ENST00000461897 PODXLO00592 558 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 EXTL3O43909 919 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 MSCO60682 206 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 RASSF9O75901 435 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 IGHA2P01877 340 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 SRGAP2CP0DJJ0 459 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 CYP2B6P20813 491 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 CDR1P51861 262 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 EFNA5P52803 228 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 NLRP11P59045 1033 aaKnown RBP13.29□□□□□ -0.28
COL4A6-204ENST00000461897 TNFAIP2Q03169 654 aa13.29□□□□□ -0.28
COL4A6-204ENST00000461897 IFT88Q13099 833 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms