RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SLC39A14Q15043 492 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 SEZ6Q53EL9 994 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 TPGS2Q68CL5 300 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 ALYREFQ86V81 257 aaKnown RBP9.98□□□□□ -0.81
BRCA1-207ENST00000461798 MAP4K3Q8IVH8 894 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 CD302Q8IX05 232 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 TCEAL8Q8IYN2 117 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 TMEM105Q8N8V8 129 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 APPL2Q8NEU8 664 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 SLC7A14Q8TBB6 771 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 RSAD2Q8WXG1 361 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 EPSTI1Q96J88 318 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 ZSCAN16Q9H4T2 348 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-207ENST00000461798 STK17AQ9UEE5 414 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 CCDC39Q9UFE4 941 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 CDH7Q9ULB5 785 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 UBQLN1Q9UMX0 589 aaKnown RBP9.98□□□□□ -0.81
BRCA1-207ENST00000461798 MTMR6Q9Y217 621 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 NUB1Q9Y5A7 615 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 STYXL1Q9Y6J8 313 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 PLXNA3P51805 1871 aa9.98□□□□□ -0.81
BRCA1-207ENST00000461798 MTCL1Q9Y4B5 1905 aaKnown RBP9.97□□□□□ -0.81
BRCA1-207ENST00000461798 LACTBL1A8MY62 500 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 M0QZQ0 153 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 HNRNPDLO14979 420 aaKnown RBP9.97□□□□□ -0.81
BRCA1-207ENST00000461798 CCL16O15467 120 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 NARSO43776 548 aaKnown RBP9.97□□□□□ -0.81
BRCA1-207ENST00000461798 OAZ2O95190 189 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 KRT18P05783 430 aaKnown RBP9.97□□□□□ -0.81
BRCA1-207ENST00000461798 CXCL8P10145 99 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 SRFP11831 508 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 ATF2P15336 505 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 AOC1P19801 751 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 MARCKSP29966 332 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-207ENST00000461798 MRE11P49959 708 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 ENOX2Q16206 610 aaKnown RBP9.97□□□□□ -0.81
BRCA1-207ENST00000461798 SLFN12LQ6IEE8 588 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 SLC39A4Q6P5W5 647 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 ZNF720Q7Z2F6 126 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 RASSF8Q8NHQ8 419 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 DDX12PQ92771 950 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 FGF13Q92913 245 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 BICD1Q96G01 975 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 RTP3Q9BQQ7 232 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 STRA6Q9BX79 667 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 OXCT2Q9BYC2 517 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-207ENST00000461798 SLC2A4RGQ9NR83 387 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 DNMT3BQ9UBC3 853 aaKnown RBP9.97□□□□□ -0.81
BRCA1-207ENST00000461798 TUBGCP4Q9UGJ1 667 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 FBXL5Q9UKA1 691 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 CPSF3Q9UKF6 684 aaKnown RBP9.97□□□□□ -0.81
BRCA1-207ENST00000461798 C2orf16Q68DN1 1984 aa9.97□□□□□ -0.81
BRCA1-207ENST00000461798 WDR27A2RRH5 827 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 K7ELQ4 463 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-207ENST00000461798 K7ENM7 598 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 XPOTO43592 962 aaKnown RBP9.96□□□□□ -0.82
BRCA1-207ENST00000461798 TBCAO75347 108 aaKnown RBP9.96□□□□□ -0.82
BRCA1-207ENST00000461798 PPP1R37O75864 691 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 MICAL2O94851 1124 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 PTPN2P17706 415 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 NMT1P30419 496 aaKnown RBP9.96□□□□□ -0.82
BRCA1-207ENST00000461798 TNFSF9P41273 254 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 MATR3P43243 847 aaKnown RBP eCLIP9.96□□□□□ -0.82
BRCA1-207ENST00000461798 NASPP49321 788 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-207ENST00000461798 NTHL1P78549 312 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 PPP2R3AQ06190 1150 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 SPECC1Q5M775 1068 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 ZBTB41Q5SVQ8 909 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 SPATA1Q5VX52 437 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 RRAGBQ5VZM2 374 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 CWF19L1Q69YN2 538 aaKnown RBP9.96□□□□□ -0.82
BRCA1-207ENST00000461798 ZNF280DQ6N043 979 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 FAM173BQ6P4H8 233 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 GET4Q7L5D6 327 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-207ENST00000461798 EFCAB3Q8N7B9 438 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 KRI1Q8N9T8 703 aaKnown RBP9.96□□□□□ -0.82
BRCA1-207ENST00000461798 BEST2Q8NFU1 509 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 ITFG1Q8TB96 612 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 SNX21Q969T3 373 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 HVCN1Q96D96 273 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 DNAJC19Q96DA6 116 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 CLIC6Q96NY7 704 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 USP28Q96RU2 1077 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 MSTO1Q9BUK6 570 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 MFSD1Q9H3U5 465 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 ASB7Q9H672 318 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 RPF1Q9H9Y2 349 aaKnown RBP9.96□□□□□ -0.82
BRCA1-207ENST00000461798 GDE1Q9NZC3 331 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 SEL1LQ9UBV2 794 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 AFF4Q9UHB7 1163 aaKnown RBP9.96□□□□□ -0.82
BRCA1-207ENST00000461798 FBXL21Q9UKT6 434 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 DERAQ9Y315 318 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 NUMBLQ9Y6R0 609 aa9.96□□□□□ -0.82
BRCA1-207ENST00000461798 VWA8A3KMH1 1905 aa9.95□□□□□ -0.82
BRCA1-207ENST00000461798 KRBA1A5PL33 1030 aa9.95□□□□□ -0.82
BRCA1-207ENST00000461798 MYMKA6NI61 221 aa9.95□□□□□ -0.82
BRCA1-207ENST00000461798 ANKRD63C9JTQ0 380 aa9.95□□□□□ -0.82
BRCA1-207ENST00000461798 PIRO00625 290 aa9.95□□□□□ -0.82
BRCA1-207ENST00000461798 PI15O43692 258 aa9.95□□□□□ -0.82
BRCA1-207ENST00000461798 STX6O43752 255 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms