RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 NOC3LQ8WTT2 800 aaKnown RBP11.99□□□□□ -0.49
APTX-209ENST00000460940 TSG101Q99816 390 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 PAAF1Q9BRP4 392 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 VN1R3Q9BXE9 311 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 GOLGA2P5Q9HBQ8 144 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 FAM53CQ9NYF3 392 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 MAPK8IP1Q9UQF2 711 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 SSX2IPQ9Y2D8 614 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 IRAK3Q9Y616 596 aa11.99□□□□□ -0.49
APTX-209ENST00000460940 SMTNL1A8MU46 457 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 MAPK13O15264 365 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 NCK2O43639 380 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 URODP06132 367 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 PRCPP42785 496 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 LRRC63Q05C16 580 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 SPAG1Q07617 926 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 CYP24A1Q07973 514 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 PSMD6Q15008 389 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 CENPPQ6IPU0 288 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 FOXR2Q6PJQ5 311 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 TMC7Q7Z402 723 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 EFCAB13Q8IY85 973 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 PLCD3Q8N3E9 789 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 CACTINQ8WUQ7 758 aaKnown RBP11.98□□□□□ -0.49
APTX-209ENST00000460940 DHTKD1Q96HY7 919 aaPredicted RBP11.98□□□□□ -0.49
APTX-209ENST00000460940 CDCA3Q99618 268 aaPredicted RBP11.98□□□□□ -0.49
APTX-209ENST00000460940 CACNG4Q9UBN1 327 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 FRMD4BQ9Y2L6 1034 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 TRIP11Q15643 1979 aa11.98□□□□□ -0.49
APTX-209ENST00000460940 F8W810 466 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 NR2F2P24468 414 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 IRS1P35568 1242 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 ERVFC1P60507 584 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 CREMQ03060 361 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 USP41Q3LFD5 358 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 PLPP4Q5VZY2 271 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 PDXDC1Q6P996 788 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 WDR49Q8IV35 697 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 MICALL1Q8N3F8 863 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 MICAL1Q8TDZ2 1067 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 MFSD14AQ96MC6 490 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 YY1AP1Q9H869 796 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 ANK1P16157 1881 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 GOLGA6L6A8MZA4 724 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 BIN1O00499 593 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 GLUD2P49448 558 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 TFAMQ00059 246 aaKnown RBP11.97□□□□□ -0.49
APTX-209ENST00000460940 DSG1Q02413 1049 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 ENPEPQ07075 957 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 PTPN14Q15678 1187 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 TCEAL5Q5H9L2 206 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 USP37Q86T82 979 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 MRPL43Q8N983 215 aaKnown RBP11.97□□□□□ -0.49
APTX-209ENST00000460940 KIF18AQ8NI77 898 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 RABGGTAQ92696 567 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 FNBP1Q96RU3 617 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 CGRRF1Q99675 332 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 PDE11AQ9HCR9 933 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 MRPL17Q9NRX2 175 aaKnown RBP11.97□□□□□ -0.49
APTX-209ENST00000460940 CHST7Q9NS84 486 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 DPP3Q9NY33 737 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 ITGA11Q9UKX5 1188 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 NUB1Q9Y5A7 615 aa11.97□□□□□ -0.49
APTX-209ENST00000460940 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.96□□□□□ -0.49
APTX-209ENST00000460940 ANO9A1A5B4 782 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 BICDL2A1A5D9 508 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 C2orf71A6NGG8 1288 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 TMEM191BP0C7N4 346 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 BMP6P22004 513 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 CCNE1P24864 410 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 WNT7BP56706 349 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 COL19A1Q14993 1142 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 DUOXA2Q1HG44 320 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 C9orf57Q5W0N0 161 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 KIAA1841Q6NSI8 718 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 ZC3H3Q8IXZ2 948 aaKnown RBP11.96□□□□□ -0.49
APTX-209ENST00000460940 C3orf58Q8NDZ4 430 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 HASPINQ8TF76 798 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 ANKRD36BP1Q96IX9 119 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 ZNF560Q96MR9 790 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 TTPALQ9BTX7 342 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 MKNK1Q9BUB5 465 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 GPR62Q9BZJ7 368 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.96□□□□□ -0.49
APTX-209ENST00000460940 INTS13Q9NVM9 706 aa11.96□□□□□ -0.49
APTX-209ENST00000460940 ATG2AQ2TAZ0 1938 aa11.96□□□□□ -0.5
APTX-209ENST00000460940 MYO7AQ13402 2215 aa11.95□□□□□ -0.5
APTX-209ENST00000460940 ARHGEF37A1IGU5 675 aa11.95□□□□□ -0.5
APTX-209ENST00000460940 SYN3O14994 580 aa11.95□□□□□ -0.5
APTX-209ENST00000460940 CETN3O15182 167 aa11.95□□□□□ -0.5
APTX-209ENST00000460940 SLC16A3O15427 465 aaKnown RBP11.95□□□□□ -0.5
APTX-209ENST00000460940 CSPG5O95196 566 aa11.95□□□□□ -0.5
APTX-209ENST00000460940 CXCL14O95715 111 aa11.95□□□□□ -0.5
APTX-209ENST00000460940 TNNC2P02585 160 aa11.95□□□□□ -0.5
APTX-209ENST00000460940 FGFR3P22607 806 aa11.95□□□□□ -0.5
APTX-209ENST00000460940 PNPLA4P41247 253 aa11.95□□□□□ -0.5
APTX-209ENST00000460940 AARSP49588 968 aaKnown RBP eCLIP11.95□□□□□ -0.5
APTX-209ENST00000460940 AP3M2P53677 418 aa11.95□□□□□ -0.5
APTX-209ENST00000460940 FKBP3Q00688 224 aaKnown RBP11.95□□□□□ -0.5
APTX-209ENST00000460940 ADAM9Q13443 819 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms