RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 PSMC2P35998 433 aaKnown RBP15.13■□□□□ 0.01
HDLBP-229ENST00000460826 PLXNA3P51805 1871 aa15.13■□□□□ 0.01
HDLBP-229ENST00000460826 NFKBIBQ15653 356 aa15.13■□□□□ 0.01
HDLBP-229ENST00000460826 FOXR2Q6PJQ5 311 aa15.13■□□□□ 0.01
HDLBP-229ENST00000460826 ADGRD2Q7Z7M1 963 aa15.13■□□□□ 0.01
HDLBP-229ENST00000460826 MICALL1Q8N3F8 863 aa15.13■□□□□ 0.01
HDLBP-229ENST00000460826 CACTINQ8WUQ7 758 aaKnown RBP15.13■□□□□ 0.01
HDLBP-229ENST00000460826 ANKRD36BP1Q96IX9 119 aa15.13■□□□□ 0.01
HDLBP-229ENST00000460826 TCF25Q9BQ70 676 aa15.13■□□□□ 0.01
HDLBP-229ENST00000460826 ENTPD7Q9NQZ7 604 aa15.13■□□□□ 0.01
HDLBP-229ENST00000460826 RWDD2AQ9UIY3 292 aa15.13■□□□□ 0.01
HDLBP-229ENST00000460826 SF3B1O75533 1304 aaKnown RBP eCLIP15.13■□□□□ 0.01
HDLBP-229ENST00000460826 TNNC2P02585 160 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 ITGB3P05106 788 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 TRIM49P0CI25 452 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 TRIM49CP0CI26 452 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 CTSAP10619 480 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 POLR2BP30876 1174 aaKnown RBP15.12■□□□□ 0.01
HDLBP-229ENST00000460826 PTPN14Q15678 1187 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 CCDC85BQ15834 202 aaPredicted RBP15.12■□□□□ 0.01
HDLBP-229ENST00000460826 DUOXA2Q1HG44 320 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 TIGD5Q53EQ6 642 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 TCEAL5Q5H9L2 206 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 RTP2Q5QGT7 225 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 FAM171A1Q5VUB5 890 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 C11orf57Q6ZUT1 292 aaPredicted RBP15.12■□□□□ 0.01
HDLBP-229ENST00000460826 TRAPPC11Q7Z392 1133 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 TMC2Q8TDI7 906 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 MICAL1Q8TDZ2 1067 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 CEP63Q96MT8 703 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 MKNK1Q9BUB5 465 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 CHST7Q9NS84 486 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 AGAP1Q9UPQ3 857 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 NUB1Q9Y5A7 615 aa15.12■□□□□ 0.01
HDLBP-229ENST00000460826 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.12■□□□□ 0.01
HDLBP-229ENST00000460826 PRUNE2Q8WUY3 3088 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 C2orf71A6NGG8 1288 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 C2CD2LO14523 706 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 SLC16A3O15427 465 aaKnown RBP15.11■□□□□ 0.01
HDLBP-229ENST00000460826 LILRB3O75022 631 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 CXCL14O95715 111 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 EPB41P11171 864 aaKnown RBP15.11■□□□□ 0.01
HDLBP-229ENST00000460826 FGFR3P22607 806 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 TKTP29401 623 aaKnown RBP15.11■□□□□ 0.01
HDLBP-229ENST00000460826 GTF2F1P35269 517 aaKnown RBP eCLIP15.11■□□□□ 0.01
HDLBP-229ENST00000460826 GLUD2P49448 558 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 AARSP49588 968 aaKnown RBP eCLIP15.11■□□□□ 0.01
HDLBP-229ENST00000460826 VAMP7P51809 220 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 LILRA4P59901 499 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 MCCD1P59942 119 aaPredicted RBP15.11■□□□□ 0.01
HDLBP-229ENST00000460826 CLDN10P78369 228 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 BFSP1Q12934 665 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 SMC1AQ14683 1233 aaKnown RBP15.11■□□□□ 0.01
HDLBP-229ENST00000460826 USP41Q3LFD5 358 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 KIAA0319Q5VV43 1072 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 SASS6Q6UVJ0 657 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 INTS8Q75QN2 995 aaKnown RBP15.11■□□□□ 0.01
HDLBP-229ENST00000460826 CSGALNACT2Q8N6G5 542 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 PPM1EQ8WY54 764 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 SYAP1Q96A49 352 aaPredicted RBP15.11■□□□□ 0.01
HDLBP-229ENST00000460826 SUSD3Q96L08 255 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 SRRTQ9BXP5 876 aaKnown RBP15.11■□□□□ 0.01
HDLBP-229ENST00000460826 NSUN3Q9H649 340 aaKnown RBP15.11■□□□□ 0.01
HDLBP-229ENST00000460826 NGRNQ9NPE2 291 aaKnown RBP15.11■□□□□ 0.01
HDLBP-229ENST00000460826 ITGA11Q9UKX5 1188 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 COL6A3P12111 3177 aa15.11■□□□□ 0.01
HDLBP-229ENST00000460826 SPTBN5Q9NRC6 3674 aaKnown RBP15.1■□□□□ 0.01
HDLBP-229ENST00000460826 MTCL1Q9Y4B5 1905 aaKnown RBP15.1■□□□□ 0.01
HDLBP-229ENST00000460826 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.1■□□□□ 0.01
HDLBP-229ENST00000460826 M0QZQ0 153 aa15.1■□□□□ 0.01
HDLBP-229ENST00000460826 CST3P01034 146 aaPredicted RBP15.1■□□□□ 0.01
HDLBP-229ENST00000460826 C4BPAP04003 597 aaKnown RBP15.1■□□□□ 0.01
HDLBP-229ENST00000460826 URODP06132 367 aa15.1■□□□□ 0.01
HDLBP-229ENST00000460826 KRT19P08727 400 aa15.1■□□□□ 0.01
HDLBP-229ENST00000460826 KRT13P13646 458 aa15.1■□□□□ 0.01
HDLBP-229ENST00000460826 CA8P35219 290 aa15.1■□□□□ 0.01
HDLBP-229ENST00000460826 TAF6P49848 677 aa15.1■□□□□ 0.01
HDLBP-229ENST00000460826 DSG1Q02413 1049 aa15.1■□□□□ 0.01
HDLBP-229ENST00000460826 TYRO3Q06418 890 aa15.1■□□□□ 0.01
HDLBP-229ENST00000460826 PPP3CAQ08209 521 aa15.1■□□□□ 0.01
HDLBP-229ENST00000460826 ELAVL2Q12926 359 aaKnown RBP15.1■□□□□ 0.01
HDLBP-229ENST00000460826 TDRD10Q5VZ19 366 aaKnown RBP15.1■□□□□ 0.01
HDLBP-229ENST00000460826 PRSS55Q6UWB4 352 aaPredicted RBP15.1■□□□□ 0.01
HDLBP-229ENST00000460826 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.1■□□□□ 0.01
HDLBP-229ENST00000460826 FILIP1Q7Z7B0 1213 aa15.1■□□□□ 0.01
HDLBP-229ENST00000460826 RBM23Q86U06 439 aaKnown RBP15.1■□□□□ 0.01
HDLBP-229ENST00000460826 CEP57Q86XR8 500 aa15.1■□□□□ 0.01
HDLBP-229ENST00000460826 MRPL43Q8N983 215 aaKnown RBP15.1■□□□□ 0.01
HDLBP-229ENST00000460826 RIN2Q8WYP3 895 aaPredicted RBP15.1■□□□□ 0.01
HDLBP-229ENST00000460826 TTPALQ9BTX7 342 aa15.1■□□□□ 0.01
HDLBP-229ENST00000460826 STXBP5LQ9Y2K9 1186 aa15.1■□□□□ 0.01
HDLBP-229ENST00000460826 IRAK3Q9Y616 596 aa15.1■□□□□ 0.01
HDLBP-229ENST00000460826 PER2O15055 1255 aa15.09■□□□□ 0.01
HDLBP-229ENST00000460826 TRAPPC3O43617 180 aa15.09■□□□□ 0.01
HDLBP-229ENST00000460826 VNN1O95497 513 aa15.09■□□□□ 0.01
HDLBP-229ENST00000460826 RPL17P18621 184 aaKnown RBP15.09■□□□□ 0.01
HDLBP-229ENST00000460826 ERCC5P28715 1186 aaPredicted RBP15.09■□□□□ 0.01
HDLBP-229ENST00000460826 GCLMP48507 274 aa15.09■□□□□ 0.01
HDLBP-229ENST00000460826 NRIP1P48552 1158 aa15.09■□□□□ 0.01
HDLBP-229ENST00000460826 RBP5P82980 135 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms