RNA–Protein interactions for RNA: ENST00000460331.5

ZNF3-211, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-211ENST00000460331 ZNF689Q96CS4 500 aaPredicted RBP13.42□□□□□ -0.26
ZNF3-211ENST00000460331 HPDLQ96IR7 371 aa13.42□□□□□ -0.26
ZNF3-211ENST00000460331 RNPC3Q96LT9 517 aaKnown RBP13.42□□□□□ -0.26
ZNF3-211ENST00000460331 TMEM175Q9BSA9 504 aa13.42□□□□□ -0.26
ZNF3-211ENST00000460331 COLEC11Q9BWP8 271 aa13.42□□□□□ -0.26
ZNF3-211ENST00000460331 LSM14BQ9BX40 385 aaKnown RBP13.42□□□□□ -0.26
ZNF3-211ENST00000460331 INTS2Q9H0H0 1204 aaKnown RBP13.42□□□□□ -0.26
ZNF3-211ENST00000460331 PLAGL2Q9UPG8 496 aa13.42□□□□□ -0.26
ZNF3-211ENST00000460331 CENPFP49454 3210 aa13.42□□□□□ -0.26
ZNF3-211ENST00000460331 ANK1P16157 1881 aa13.42□□□□□ -0.26
ZNF3-211ENST00000460331 ARHGEF37A1IGU5 675 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 CASTOR2A6NHX0 329 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 PODXLO00592 558 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 DDHD2O94830 711 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 ASS1P00966 412 aaKnown RBP13.41□□□□□ -0.26
ZNF3-211ENST00000460331 TRIM21P19474 475 aaKnown RBP13.41□□□□□ -0.26
ZNF3-211ENST00000460331 OR1G1P47890 313 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 GATMP50440 423 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 GUCY2FP51841 1108 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 SOX4Q06945 474 aaPredicted RBP13.41□□□□□ -0.26
ZNF3-211ENST00000460331 DSC1Q08554 894 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 SPOUT1Q5T280 376 aaKnown RBP13.41□□□□□ -0.26
ZNF3-211ENST00000460331 RASIP1Q5U651 963 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 SMYD5Q6GMV2 418 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 TRIM65Q6PJ69 517 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 ENOSF1Q7L5Y1 443 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 PPFIBP1Q86W92 1011 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 COLGALT2Q8IYK4 626 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 ZNF397Q8NF99 534 aaPredicted RBP13.41□□□□□ -0.26
ZNF3-211ENST00000460331 LMO3Q8TAP4 145 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 RAD9AQ99638 391 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 GDF15Q99988 308 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 EDEM3Q9BZQ6 932 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 NRDE2Q9H7Z3 1164 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 VRTNQ9H8Y1 702 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 GOLGA2P5Q9HBQ8 144 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 AAASQ9NRG9 546 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 CXXC1Q9P0U4 656 aaPredicted RBP13.41□□□□□ -0.26
ZNF3-211ENST00000460331 SIX4Q9UIU6 781 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 SIK3Q9Y2K2 1263 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 FAN1Q9Y2M0 1017 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 NUB1Q9Y5A7 615 aa13.41□□□□□ -0.26
ZNF3-211ENST00000460331 H0YGN5 161 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 TRAPPC3O43617 180 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 B3GAT3O94766 335 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 TBXAS1P24557 533 aaPredicted RBP13.4□□□□□ -0.26
ZNF3-211ENST00000460331 BMP8BP34820 402 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 ALDH7A1P49419 539 aaKnown RBP13.4□□□□□ -0.26
ZNF3-211ENST00000460331 CLCNKBP51801 687 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 MFAP3P55082 362 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 YWHAEP62258 255 aaKnown RBP13.4□□□□□ -0.26
ZNF3-211ENST00000460331 TNNC1P63316 161 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 NOP14P78316 857 aaKnown RBP13.4□□□□□ -0.26
ZNF3-211ENST00000460331 HTRA4P83105 476 aaPredicted RBP13.4□□□□□ -0.26
ZNF3-211ENST00000460331 LRMPQ12912 555 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 SHHQ15465 462 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 UPP1Q16831 310 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 WDR72Q3MJ13 1102 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 PAN2Q504Q3 1202 aaKnown RBP13.4□□□□□ -0.26
ZNF3-211ENST00000460331 FIGNQ5HY92 759 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 KLHDC7AQ5VTJ3 777 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 CACNA2D4Q7Z3S7 1137 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 TMC6Q7Z403 805 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 ZNF280BQ86YH2 543 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 FMNL3Q8IVF7 1028 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 FIBCD1Q8N539 461 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 CXorf38Q8TB03 319 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 SEMA4DQ92854 862 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 FAM84AQ96KN4 292 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 FAM207AQ9NSI2 230 aaPredicted RBP13.4□□□□□ -0.26
ZNF3-211ENST00000460331 PCDH10Q9P2E7 1040 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 IMPACTQ9P2X3 320 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 APEX2Q9UBZ4 518 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 FBXL5Q9UKA1 691 aa13.4□□□□□ -0.26
ZNF3-211ENST00000460331 KPNA7A9QM74 516 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 TMEM189-UBE2V1I3L0A0 370 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 TLL1O43897 1013 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 TADA2AO75478 443 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 CAPN15O75808 1086 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 FAM163BP0C2L3 166 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 LAG3P18627 525 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 GCNT1Q02742 428 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 MLLT1Q03111 559 aaPredicted RBP13.39□□□□□ -0.27
ZNF3-211ENST00000460331 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 DPH6Q7L8W6 267 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 PPM1KQ8N3J5 372 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 TTC39CQ8N584 583 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 JAKMIP2Q96AA8 810 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 PI4K2AQ9BTU6 479 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 DNAI2Q9GZS0 605 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 NIF3L1Q9GZT8 377 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 XYLT2Q9H1B5 865 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 FAM124BQ9H5Z6 455 aaPredicted RBP13.39□□□□□ -0.27
ZNF3-211ENST00000460331 RC3H2Q9HBD1 1191 aaKnown RBP13.39□□□□□ -0.27
ZNF3-211ENST00000460331 UBE2TQ9NPD8 197 aaPredicted RBP13.39□□□□□ -0.27
ZNF3-211ENST00000460331 CEP72Q9P209 647 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 NXF1Q9UBU9 619 aaKnown RBP13.39□□□□□ -0.27
ZNF3-211ENST00000460331 DNAJC12Q9UKB3 198 aa13.39□□□□□ -0.27
ZNF3-211ENST00000460331 PDCD11Q14690 1871 aaKnown RBP13.39□□□□□ -0.27
ZNF3-211ENST00000460331 TDRD15B5MCY1 1934 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms