RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 LINC01465Q8N7H1 131 aa9.04□□□□□ -0.96
NCSTN-209ENST00000459963 LNX1Q8TBB1 728 aaPredicted RBP9.04□□□□□ -0.96
NCSTN-209ENST00000459963 RSPRY1Q96DX4 576 aa9.04□□□□□ -0.96
NCSTN-209ENST00000459963 CORO1BQ9BR76 489 aa9.04□□□□□ -0.96
NCSTN-209ENST00000459963 ADAM28Q9UKQ2 775 aa9.04□□□□□ -0.96
NCSTN-209ENST00000459963 UBIAD1Q9Y5Z9 338 aa9.04□□□□□ -0.96
NCSTN-209ENST00000459963 PCDH15Q96QU1 1955 aa9.04□□□□□ -0.96
NCSTN-209ENST00000459963 TNRC6BQ9UPQ9 1833 aaKnown RBP9.03□□□□□ -0.96
NCSTN-209ENST00000459963 BACH1O14867 736 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 IPO8O15397 1037 aaKnown RBP9.03□□□□□ -0.96
NCSTN-209ENST00000459963 MAGEB2O15479 319 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 SYPP08247 313 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 SFPQP23246 707 aaKnown RBP eCLIP9.03□□□□□ -0.96
NCSTN-209ENST00000459963 ITPKAP23677 461 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 PRR20EP86478 221 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 PRR20CP86479 221 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 PRR20DP86480 221 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 PRR20BP86481 221 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 PRR20AP86496 221 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 KCNH2Q12809 1159 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 RAB33AQ14088 237 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 SMAD1Q15797 465 aaKnown RBP9.03□□□□□ -0.96
NCSTN-209ENST00000459963 SPDYCQ5MJ68 293 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 LYSMD4Q5XG99 296 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 ATG14Q6ZNE5 492 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 PDZD4Q76G19 769 aaPredicted RBP9.03□□□□□ -0.96
NCSTN-209ENST00000459963 HAUS6Q7Z4H7 955 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 MRPL10Q7Z7H8 261 aaKnown RBP9.03□□□□□ -0.96
NCSTN-209ENST00000459963 SPACA3Q8IXA5 215 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 LRRC71Q8N4P6 559 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 TMEM57Q8N5G2 664 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 TSTD1Q8NFU3 115 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 RPLP0P6Q8NHW5 317 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 SMARCC2Q8TAQ2 1214 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 ZFYVE19Q96K21 471 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 USB1Q9BQ65 265 aaKnown RBP9.03□□□□□ -0.96
NCSTN-209ENST00000459963 SDF4Q9BRK5 362 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 ZKSCAN3Q9BRR0 538 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 GCOM2Q9BZD3 368 aaPredicted RBP9.03□□□□□ -0.96
NCSTN-209ENST00000459963 KAT14Q9H8E8 782 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 SNTG2Q9NY99 539 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 SEPT3Q9UH03 358 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 MAN2B2Q9Y2E5 1009 aa9.03□□□□□ -0.96
NCSTN-209ENST00000459963 FAM187AA6NFU0 413 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 EGFP01133 1207 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 LRG1P02750 347 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 ATXN1LP0C7T5 689 aaKnown RBP9.02□□□□□ -0.97
NCSTN-209ENST00000459963 ATP4AP20648 1035 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 ELAVL4P26378 380 aaKnown RBP9.02□□□□□ -0.97
NCSTN-209ENST00000459963 CCDC173Q0VFZ6 552 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 NFATC3Q12968 1075 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 ARHGAP29Q52LW3 1261 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 ARHGAP40Q5TG30 622 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 HIST2H2BCQ6DN03 193 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 RABEPKQ7Z6M1 372 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 RASSF3Q86WH2 238 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 HOMER1Q86YM7 354 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 CCDC60Q8IWA6 550 aaPredicted RBP9.02□□□□□ -0.97
NCSTN-209ENST00000459963 STAG2Q8N3U4 1231 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 ACDQ96AP0 544 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 CNOT6LQ96LI5 555 aaKnown RBP9.02□□□□□ -0.97
NCSTN-209ENST00000459963 FNBP1Q96RU3 617 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 TTPALQ9BTX7 342 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 ZNF302Q9NR11 478 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 CEP131Q9UPN4 1083 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 FBN3Q75N90 2809 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 SF3B1O75533 1304 aaKnown RBP eCLIP9.02□□□□□ -0.97
NCSTN-209ENST00000459963 NFASCO94856 1347 aa9.02□□□□□ -0.97
NCSTN-209ENST00000459963 PALM3A6NDB9 673 aaPredicted RBP9.01□□□□□ -0.97
NCSTN-209ENST00000459963 TRDMT1O14717 391 aaKnown RBP9.01□□□□□ -0.97
NCSTN-209ENST00000459963 MOSPD3O75425 235 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 TADA2AO75478 443 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 CD2BP2O95400 341 aaKnown RBP9.01□□□□□ -0.97
NCSTN-209ENST00000459963 TMPRSS3P57727 454 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 TNK2Q07912 1038 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 SPIRE1Q08AE8 756 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 PTPAQ15257 358 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 C6orf118Q5T5N4 469 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 CYP4A22Q5TCH4 519 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 USP17L6PQ6QN14 398 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 ABHD15Q6UXT9 468 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 CEP57Q86XR8 500 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 CKAP2LQ8IYA6 745 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 BAHD1Q8TBE0 780 aaPredicted RBP9.01□□□□□ -0.97
NCSTN-209ENST00000459963 SETD7Q8WTS6 366 aaKnown RBP9.01□□□□□ -0.97
NCSTN-209ENST00000459963 FGF11Q92914 225 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 CUL5Q93034 780 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 UBN1Q9NPG3 1134 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 AK5Q9Y6K8 562 aa9.01□□□□□ -0.97
NCSTN-209ENST00000459963 ARHGEF37A1IGU5 675 aa9□□□□□ -0.97
NCSTN-209ENST00000459963 CLEC18AA5D8T8 446 aa9□□□□□ -0.97
NCSTN-209ENST00000459963 ARL5CA6NH57 179 aa9□□□□□ -0.97
NCSTN-209ENST00000459963 KLRF2D3W0D1 207 aa9□□□□□ -0.97
NCSTN-209ENST00000459963 OR1D2P34982 312 aa9□□□□□ -0.97
NCSTN-209ENST00000459963 PI4KAP42356 2102 aa9□□□□□ -0.97
NCSTN-209ENST00000459963 GUCA2AQ02747 115 aa9□□□□□ -0.97
NCSTN-209ENST00000459963 ITPRIPL2Q3MIP1 535 aa9□□□□□ -0.97
NCSTN-209ENST00000459963 FBXO43Q4G163 708 aa9□□□□□ -0.97
NCSTN-209ENST00000459963 LMBRD2Q68DH5 695 aaPredicted RBP9□□□□□ -0.97
NCSTN-209ENST00000459963 ANO7Q6IWH7 933 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms