RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 TCEAL4Q96EI5 215 aa11.42□□□□□ -0.58
HDLBP-227ENST00000458564 DRC1Q96MC2 740 aa11.42□□□□□ -0.58
HDLBP-227ENST00000458564 ACAP3Q96P50 834 aa11.42□□□□□ -0.58
HDLBP-227ENST00000458564 LLPHQ9BRT6 129 aaKnown RBP11.42□□□□□ -0.58
HDLBP-227ENST00000458564 TRMT61BQ9BVS5 477 aaKnown RBP11.42□□□□□ -0.58
HDLBP-227ENST00000458564 BRD9Q9H8M2 597 aa11.42□□□□□ -0.58
HDLBP-227ENST00000458564 TRPV4Q9HBA0 871 aa11.42□□□□□ -0.58
HDLBP-227ENST00000458564 CYP4F11Q9HBI6 524 aa11.42□□□□□ -0.58
HDLBP-227ENST00000458564 POLD4Q9HCU8 107 aa11.42□□□□□ -0.58
HDLBP-227ENST00000458564 DDX19AQ9NUU7 478 aaKnown RBP11.42□□□□□ -0.58
HDLBP-227ENST00000458564 LRWD1Q9UFC0 647 aa11.42□□□□□ -0.58
HDLBP-227ENST00000458564 AFF4Q9UHB7 1163 aaKnown RBP11.42□□□□□ -0.58
HDLBP-227ENST00000458564 FBXL5Q9UKA1 691 aa11.42□□□□□ -0.58
HDLBP-227ENST00000458564 KIAA1024Q9UPX6 916 aa11.42□□□□□ -0.58
HDLBP-227ENST00000458564 RBM19Q9Y4C8 960 aaKnown RBP11.42□□□□□ -0.58
HDLBP-227ENST00000458564 CCDC169A6NNP5 214 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 PRR5-ARHGAP8B1AHC4 643 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 ARNTLO00327 626 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 MEFVO15553 781 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-227ENST00000458564 HIP1RO75146 1068 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 MOSPD3O75425 235 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 PSMC3P17980 439 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 NRLP54845 237 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 MLLT6P55198 1093 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-227ENST00000458564 OSTNP61366 133 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 ARHGAP8P85298 464 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 PPP2R5DQ14738 602 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 CYP4A22Q5TCH4 519 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 IQCEQ6IPM2 695 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 TSSK4Q6SA08 328 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 VITQ6UXI7 678 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 ELMOD1Q8N336 334 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 APPL2Q8NEU8 664 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 BEST2Q8NFU1 509 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 SNX29Q8TEQ0 813 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 NTPCRQ9BSD7 190 aaKnown RBP11.41□□□□□ -0.58
HDLBP-227ENST00000458564 TIPINQ9BVW5 301 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 TARS2Q9BW92 718 aaKnown RBP11.41□□□□□ -0.58
HDLBP-227ENST00000458564 RAB34Q9BZG1 259 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 ZNF334Q9HCZ1 680 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-227ENST00000458564 NUB1Q9Y5A7 615 aa11.41□□□□□ -0.58
HDLBP-227ENST00000458564 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-227ENST00000458564 NRG2O14511 850 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-227ENST00000458564 EIF5BO60841 1220 aaKnown RBP11.4□□□□□ -0.58
HDLBP-227ENST00000458564 TOM1L1O75674 476 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 GUCY2CP25092 1073 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 CCR3P51677 355 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 HMGN5P82970 282 aaKnown RBP11.4□□□□□ -0.58
HDLBP-227ENST00000458564 GRM2Q14416 872 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 CTXN3Q4LDR2 81 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 C1orf228Q6PIY5 440 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 C1orf186Q6ZWK4 172 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 SPIRE2Q8WWL2 714 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 DDX12PQ92771 950 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 C18orf25Q96B23 403 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-227ENST00000458564 MSANTD3Q96H12 275 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 ZSWIM3Q96MP5 696 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 TBC1D32Q96NH3 1257 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 RUSC1Q9BVN2 902 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 OXCT2Q9BYC2 517 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-227ENST00000458564 KMT5AQ9NQR1 393 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 ASAH2Q9NR71 780 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 CEP72Q9P209 647 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 CDV3Q9UKY7 258 aaKnown RBP11.4□□□□□ -0.58
HDLBP-227ENST00000458564 NOL7Q9UMY1 257 aaKnown RBP11.4□□□□□ -0.58
HDLBP-227ENST00000458564 PCDHB8Q9UN66 801 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 LIMCH1Q9UPQ0 1083 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 DNM3Q9UQ16 869 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 PIAS3Q9Y6X2 628 aa11.4□□□□□ -0.58
HDLBP-227ENST00000458564 CITO14578 2027 aa11.4□□□□□ -0.59
HDLBP-227ENST00000458564 NCANO14594 1321 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 E9PMD0 336 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 M0QZQ0 153 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 LAD1O00515 517 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 LRP3O75074 770 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 OAZ2O95190 189 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 U2AF2P26368 475 aaKnown RBP eCLIP11.39□□□□□ -0.592e-9■■■□□ 15.4
HDLBP-227ENST00000458564 GDI1P31150 447 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 MCM4P33991 863 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 PRPHP41219 470 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 AARSP49588 968 aaKnown RBP eCLIP11.39□□□□□ -0.59
HDLBP-227ENST00000458564 ATXN1P54253 815 aaKnown RBP11.39□□□□□ -0.59
HDLBP-227ENST00000458564 ARPP19P56211 112 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 TWF1Q12792 350 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 NOLC1Q14978 699 aaKnown RBP eCLIP11.39□□□□□ -0.59
HDLBP-227ENST00000458564 SLC10A6Q3KNW5 377 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 KRT79Q5XKE5 535 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 RINT1Q6NUQ1 792 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 ZPBP2Q6X784 338 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 MFSD6LQ8IWD5 586 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 KCTD17Q8N5Z5 321 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 CELF5Q8N6W0 485 aaKnown RBP11.39□□□□□ -0.59
HDLBP-227ENST00000458564 ZSCAN18Q8TBC5 510 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-227ENST00000458564 FAM3CQ92520 227 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 KCNN1Q92952 543 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 E2F7Q96AV8 911 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 ZNF512Q96ME7 567 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-227ENST00000458564 TCHPQ9BT92 498 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 GPR88Q9GZN0 384 aa11.39□□□□□ -0.59
HDLBP-227ENST00000458564 PLEKHA5Q9HAU0 1116 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms