RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 GAS7O60861 476 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 PSMD10O75832 226 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 KIAA0754O94854 1291 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 CPP00450 1065 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 ANXA13P27216 316 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 COX10Q12887 443 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 PIN1Q13526 163 aaPredicted RBP12.57□□□□□ -0.4
SYNE2-207ENST00000458046 DSC3Q14574 896 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 AADACL2Q6P093 401 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 LRIG3Q6UXM1 1119 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 SYCP3Q8IZU3 236 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 MYCBPAPQ8TBZ2 947 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 ACER1Q8TDN7 264 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 GLG1Q92896 1179 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 FIZ1Q96SL8 496 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 TRIM55Q9BYV6 548 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 PCIF1Q9H4Z3 704 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 NPDC1Q9NQX5 325 aaPredicted RBP12.57□□□□□ -0.4
SYNE2-207ENST00000458046 PKD2L1Q9P0L9 805 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 UTP11Q9Y3A2 253 aaKnown RBP12.57□□□□□ -0.4
SYNE2-207ENST00000458046 DDX39AO00148 427 aaKnown RBP12.57□□□□□ -0.4
SYNE2-207ENST00000458046 EIF3DO15371 548 aaKnown RBP eCLIP12.57□□□□□ -0.4
SYNE2-207ENST00000458046 EXOC3O60645 756 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 MMEP08473 750 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 ARP10275 920 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 NPEPPSP55786 919 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 SH3BGRP55822 239 aaPredicted RBP12.57□□□□□ -0.4
SYNE2-207ENST00000458046 IGF2-ASQ6U949 168 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 EIF1ADQ8N9N8 165 aaKnown RBP12.57□□□□□ -0.4
SYNE2-207ENST00000458046 RFFLQ8WZ73 363 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 CSRNP1Q96S65 589 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 SLITRK6Q9H5Y7 841 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 TUFT1Q9NNX1 390 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 TMOD4Q9NZQ9 345 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 COG5Q9UP83 839 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 CAPN7Q9Y6W3 813 aa12.57□□□□□ -0.4
SYNE2-207ENST00000458046 FAM25EA8MYX2 175 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 TISP43B9A030 160 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 DDX3YO15523 660 aaKnown RBP12.56□□□□□ -0.4
SYNE2-207ENST00000458046 MEFVO15553 781 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-207ENST00000458046 TMEM253P0C7T8 217 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 GALNSP34059 522 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 DLG4P78352 724 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 MYBPC3Q14896 1274 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 ZYXQ15942 572 aaKnown RBP12.56□□□□□ -0.4
SYNE2-207ENST00000458046 TRMT1LQ7Z2T5 733 aaKnown RBP12.56□□□□□ -0.4
SYNE2-207ENST00000458046 TMC3Q7Z5M5 1100 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 TCEAL8Q8IYN2 117 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 PJA1Q8NG27 643 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 ERVK-5Q9HDB9 667 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 APEX2Q9UBZ4 518 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 CNOT8Q9UFF9 292 aaKnown RBP12.56□□□□□ -0.4
SYNE2-207ENST00000458046 SMCHD1A6NHR9 2005 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 ECE2O60344 883 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 STAT2P52630 851 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 MYL7Q01449 175 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 PPATQ06203 517 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 LTBP1Q14766 1721 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 MAP7D1Q3KQU3 841 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 FAM102BQ5T8I3 360 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 STRIP1Q5VSL9 837 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 MZT2BQ6NZ67 158 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 SLC20A1Q8WUM9 679 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 RSAD2Q8WXG1 361 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 PRMT6Q96LA8 375 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-207ENST00000458046 ZNF577Q9BSK1 485 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 UNC45AQ9H3U1 944 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 OBP2AQ9NY56 170 aa12.56□□□□□ -0.4
SYNE2-207ENST00000458046 GREB1LQ9C091 1923 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-207ENST00000458046 SGTAO43765 313 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 IGHA2P01877 340 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 POLR2MP0CAP2 368 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 MAGOHP61326 146 aaKnown RBP12.55□□□□□ -0.4
SYNE2-207ENST00000458046 DSG2Q14126 1118 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 KRT71Q3SY84 523 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 BTNL9Q6UXG8 535 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 RUFY4Q6ZNE9 571 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 ARFGAP2Q8N6H7 521 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 CELF2-AS1Q8N7Q2 184 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 MAGOHBQ96A72 148 aaKnown RBP12.55□□□□□ -0.4
SYNE2-207ENST00000458046 GPRASP2Q96D09 838 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 NACC1Q96RE7 527 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 UBE2TQ9NPD8 197 aaPredicted RBP12.55□□□□□ -0.4
SYNE2-207ENST00000458046 CXXC1Q9P0U4 656 aaPredicted RBP12.55□□□□□ -0.4
SYNE2-207ENST00000458046 MKL2Q9ULH7 1088 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 SNCAIPQ9Y6H5 919 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 ATAD5Q96QE3 1844 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 IFFO1Q0D2I5 559 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 MTMR1Q13613 665 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 TAX1BP1Q86VP1 789 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 GSDMBQ8TAX9 411 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 ALG3Q92685 438 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 SLC5A5Q92911 643 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 ATP6V1E2Q96A05 226 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 MASTLQ96GX5 879 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 SH2D3AQ9BRG2 576 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 SYT11Q9BT88 431 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 DMAC2Q9NW81 257 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 FNIP2Q9P278 1114 aa12.55□□□□□ -0.4
SYNE2-207ENST00000458046 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms