RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 SLC18A1P54219 525 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 ARL4CP56559 192 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 MCCD1P59942 119 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 DLG4P78352 724 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 PPARDQ03181 441 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 MYO1EQ12965 1108 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 TNFAIP1Q13829 316 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 PSMD6Q15008 389 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 MORF4L2Q15014 288 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 LRRC14Q15048 493 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 PWP2Q15269 919 aaKnown RBP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 SIX1Q15475 284 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 TRIP13Q15645 432 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 ZYXQ15942 572 aaKnown RBP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 CCDC6Q16204 474 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 KYNUQ16719 465 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 HADHQ16836 314 aaKnown RBP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 PARP6Q2NL67 630 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 P3H1Q32P28 736 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 GNPTABQ3T906 1256 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 BRDTQ58F21 947 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 WASHC2DQ5SRD0 308 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 C6orf163Q5TEZ5 329 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 LRRC38Q5VT99 294 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 ARHGEF16Q5VV41 709 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 FKBP1CQ5VVH2 108 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 CYP4F22Q6NT55 531 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 AADACL2Q6P093 401 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 DNAJC24Q6P3W2 148 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 CCDC62Q6P9F0 684 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 DRICH1Q6PGQ1 229 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 DCUN1D2Q6PH85 259 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 RHBDF2Q6PJF5 856 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 VSTM1Q6UX27 236 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 B3GNT9Q6UX72 402 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 SLC51AQ86UW1 340 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 TDRPQ86YL5 185 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 CBWD2Q8IUF1 395 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 SIAH1Q8IUQ4 282 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 CDAN1Q8IWY9 1227 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 TRIM42Q8IWZ5 723 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 SEPT12Q8IYM1 358 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 DAW1Q8N136 415 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 ATP11CQ8NB49 1132 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 TMEM161BQ8NDZ6 487 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 ZNF398Q8TD17 642 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 HELQQ8TDG4 1101 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 PARD3BQ8TEW8 1205 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 SH3TC2Q8TF17 1288 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 C7orf43Q8WVR3 580 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 INPP5DQ92835 1189 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 ALKBH8Q96BT7 664 aaKnown RBP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 GPRASP2Q96D09 838 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 SAAL1Q96ER3 474 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 BTBD6Q96KE9 485 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 CEP170P1Q96L14 293 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 MFSD14AQ96MC6 490 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 KREMEN1Q96MU8 473 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 RBM15Q96T37 977 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 P2RX7Q99572 595 aaKnown RBP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 SENP7Q9BQF6 1050 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 C11orf70Q9BRQ4 267 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 DDX23Q9BUQ8 820 aaKnown RBP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 TRIM6Q9C030 488 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 ZNF518BQ9C0D4 1074 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 IQCGQ9H095 443 aaKnown RBP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 ADAM7Q9H2U9 754 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 TRABDQ9H4I3 376 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 EBF2Q9HAK2 575 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 ETNK1Q9HBU6 452 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 SAYSD1Q9NPB0 183 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 LRRC4BQ9NT99 713 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 CTNNAL1Q9UBT7 734 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 ZNF70Q9UC06 446 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 STRIP2Q9ULQ0 834 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 SUFUQ9UMX1 484 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 AGTPBP1Q9UPW5 1226 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 SHOC2Q9UQ13 582 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 ZNF148Q9UQR1 794 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 USTQ9Y2C2 406 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 PCDHB4Q9Y5E5 795 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 PCDHA10Q9Y5I2 948 aa3.53□□□□□ -1.84
HMGN1P18-201ENST00000457642 COL11A2P13942 1736 aaPredicted RBP3.53□□□□□ -1.85
HMGN1P18-201ENST00000457642 ASTN2O75129 1339 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 NFASCO94856 1347 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 MROH7Q68CQ1 1323 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 IQANK1A0A1B0GTG1 560 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 TCRBV7S2A1N4TA0A589 114 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 TESPA1A2RU30 521 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 SPDYE2BA6NHP3 402 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 POC1B-GALNT4F8VUJ3 575 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 I3L4J1 428 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 SGK1O00141 431 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 ABLIM1O14639 778 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 TM9SF1O15321 606 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 TLR3O15455 904 aaKnown RBP3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 MAGEB2O15479 319 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 MAFGO15525 162 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 MED7O43513 233 aa3.52□□□□□ -1.85
HMGN1P18-201ENST00000457642 LIASO43766 372 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms