RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 MDM2Q00987 491 aaPredicted RBP7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 PLCB3Q01970 1234 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 DNAJC3Q13217 504 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 DCTN2Q13561 401 aaKnown RBP7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 DGKZQ13574 1117 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 LETM2Q2VYF4 491 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 P3H1Q32P28 736 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 CNPY1Q3B7I2 92 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 NT5DC1Q5TFE4 455 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 DUS1LQ6P1R4 473 aaKnown RBP7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 EMBQ6PCB8 327 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 DLK2Q6UY11 383 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 SH3RF1Q7Z6J0 888 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 CAND1Q86VP6 1230 aaKnown RBP7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 LDHDQ86WU2 507 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 CKAP2LQ8IYA6 745 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 BBS5Q8N3I7 341 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 LSMEM1Q8N8F7 131 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 ENDOVQ8N8Q3 282 aaKnown RBP7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 MLKLQ8NB16 471 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 PEX13Q92968 403 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 OTUD5Q96G74 571 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 IFT74Q96LB3 600 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 AK8Q96MA6 479 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 SRPK1Q96SB4 655 aaKnown RBP7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 PYM1Q9BRP8 204 aaKnown RBP7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 FAM167BQ9BTA0 163 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 CENPOQ9BU64 300 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 CCSER1Q9C0I3 900 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 EPC1Q9H2F5 836 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 SERHL2Q9H4I8 314 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 TRPC7Q9HCX4 862 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 KIAA1257Q9ULG3 409 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 AGAP1Q9UPQ3 857 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 TSC22D4Q9Y3Q8 395 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 ARIH1Q9Y4X5 557 aaPredicted RBP7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 ZHX2Q9Y6X8 837 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 WDR81Q562E7 1941 aa7.25□□□□□ -1.25
CUBNP3-201ENST00000457461 FRMPD4Q14CM0 1322 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 KIAA1217Q5T5P2 1943 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 LOXHD1Q8IVV2 1947 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 FADS2P1A8MWK0 482 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 FOXN3O00409 490 aaPredicted RBP7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 SULT1B1O43704 296 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 SLC37A4O43826 429 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 CCNT1O60563 726 aaKnown RBP7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 FARP2O94887 1054 aaPredicted RBP7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 TDP2O95551 362 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 OLFM2O95897 454 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 KRT6AP02538 564 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 KRT6BP04259 564 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 RPN1P04843 607 aaKnown RBP7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 PIM1P11309 404 aaPredicted RBP7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 CASP14P31944 242 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 PCK1P35558 622 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 TMED10P49755 219 aaKnown RBP7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 OAZ1P54368 228 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 HMGCS2P54868 508 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 OCRLQ01968 901 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 EPHA7Q15375 998 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 CRY1Q16526 586 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 MYLK3Q32MK0 819 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 Q3C1V9 767 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 BBS9Q3SYG4 887 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 LDLRAD1Q5T700 205 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 SNX30Q5VWJ9 437 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 CCNI2Q6ZMN8 369 aaPredicted RBP7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 DTHD1Q6ZMT9 781 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 CATSPERGQ6ZRH7 1159 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 TAOK1Q7L7X3 1001 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 NUP93Q8N1F7 819 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 NOA1Q8NC60 698 aaKnown RBP7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 SPATA20Q8TB22 786 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 FBF1Q8TES7 1133 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 CLEC4DQ8WXI8 215 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 CAVIN3Q969G5 261 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 LENG9Q96B70 501 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 PANX2Q96RD6 677 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 SMARCAD1Q9H4L7 1026 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 CD93Q9NPY3 652 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 AASDHPPTQ9NRN7 309 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 METTL5Q9NRN9 209 aaKnown RBP7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 ARMC1Q9NVT9 282 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 STK17AQ9UEE5 414 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 KCNH4Q9UQ05 1017 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 CHMP2BQ9UQN3 213 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 SLC45A1Q9Y2W3 748 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 RPTORQ8N122 1335 aa7.24□□□□□ -1.25
CUBNP3-201ENST00000457461 A0A0G2JLL6 359 aaPredicted RBP7.23□□□□□ -1.25
CUBNP3-201ENST00000457461 PVALEFA0A1B0GWK0 134 aa7.23□□□□□ -1.25
CUBNP3-201ENST00000457461 HNRNPCL2B2RXH8 293 aa7.23□□□□□ -1.25
CUBNP3-201ENST00000457461 TMEM114B3SHH9 223 aa7.23□□□□□ -1.25
CUBNP3-201ENST00000457461 AKR1B15C9JRZ8 316 aaPredicted RBP7.23□□□□□ -1.25
CUBNP3-201ENST00000457461 GOLGA8MH3BSY2 632 aa7.23□□□□□ -1.25
CUBNP3-201ENST00000457461 VWA5AO00534 786 aa7.23□□□□□ -1.25
CUBNP3-201ENST00000457461 CETN3O15182 167 aa7.23□□□□□ -1.25
CUBNP3-201ENST00000457461 POLR2DO15514 142 aaKnown RBP7.23□□□□□ -1.25
CUBNP3-201ENST00000457461 HNRNPRO43390 633 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms