RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 MMP19Q99542 508 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 FAM129AQ9BZQ8 928 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 C2orf40Q9H1Z8 148 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 MCM3APO60318 1980 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 MYO1FO00160 1098 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 NOP56O00567 594 aaKnown RBP17.79■□□□□ 0.44
CCDC43-202ENST00000457422 ABLIM1O14639 778 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 ASS1P00966 412 aaKnown RBP17.79■□□□□ 0.44
CCDC43-202ENST00000457422 POTEJP0CG39 1038 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 SRGAP2CP0DJJ0 459 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 MCL1Q07820 350 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 PTP4A2Q12974 167 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 SURF1Q15526 300 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 C2CD6Q53TS8 623 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 LIN9Q5TKA1 542 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 AGBL2Q5U5Z8 902 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 FOXR1Q6PIV2 292 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 PASD1Q8IV76 773 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 ZBTB8OSQ8IWT0 167 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 FBXO16Q8IX29 292 aaPredicted RBP17.79■□□□□ 0.44
CCDC43-202ENST00000457422 JPH2Q9BR39 696 aaPredicted RBP17.79■□□□□ 0.44
CCDC43-202ENST00000457422 IMPG2Q9BZV3 1241 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 SNX24Q9Y343 169 aa17.79■□□□□ 0.44
CCDC43-202ENST00000457422 OGTO15294 1046 aa17.78■□□□□ 0.44
CCDC43-202ENST00000457422 PRKCBP05771 671 aa17.78■□□□□ 0.44
CCDC43-202ENST00000457422 SSTR3P32745 418 aaPredicted RBP17.78■□□□□ 0.44
CCDC43-202ENST00000457422 NF2P35240 595 aa17.78■□□□□ 0.44
CCDC43-202ENST00000457422 SLC26A2P50443 739 aa17.78■□□□□ 0.44
CCDC43-202ENST00000457422 EIF3BP55884 814 aaKnown RBP17.78■□□□□ 0.44
CCDC43-202ENST00000457422 PLCB4Q15147 1175 aa17.78■□□□□ 0.44
CCDC43-202ENST00000457422 CCDC62Q6P9F0 684 aa17.78■□□□□ 0.44
CCDC43-202ENST00000457422 PROSCO94903 275 aa17.78■□□□□ 0.44
CCDC43-202ENST00000457422 RPL21P46778 160 aaKnown RBP17.78■□□□□ 0.44
CCDC43-202ENST00000457422 C1QBPQ07021 282 aaKnown RBP17.78■□□□□ 0.44
CCDC43-202ENST00000457422 KCTD2Q14681 263 aa17.78■□□□□ 0.44
CCDC43-202ENST00000457422 MAPK6Q16659 721 aa17.78■□□□□ 0.44
CCDC43-202ENST00000457422 PLEKHA7Q6IQ23 1121 aa17.78■□□□□ 0.44
CCDC43-202ENST00000457422 RNF149Q8NC42 400 aa17.78■□□□□ 0.44
CCDC43-202ENST00000457422 FBXO25Q8TCJ0 367 aa17.78■□□□□ 0.44
CCDC43-202ENST00000457422 MAIP1Q8WWC4 291 aa17.78■□□□□ 0.44
CCDC43-202ENST00000457422 MRPL47Q9HD33 250 aaKnown RBP17.78■□□□□ 0.44
CCDC43-202ENST00000457422 CPSF3Q9UKF6 684 aaKnown RBP17.78■□□□□ 0.44
CCDC43-202ENST00000457422 ANK1P16157 1881 aa17.77■□□□□ 0.44
CCDC43-202ENST00000457422 NUDT17P0C025 328 aa17.77■□□□□ 0.44
CCDC43-202ENST00000457422 PROZP22891 400 aa17.77■□□□□ 0.44
CCDC43-202ENST00000457422 WDR78Q5VTH9 848 aa17.77■□□□□ 0.44
CCDC43-202ENST00000457422 FASTKD5Q7L8L6 764 aaKnown RBP17.77■□□□□ 0.44
CCDC43-202ENST00000457422 ARFGAP2Q8N6H7 521 aa17.77■□□□□ 0.44
CCDC43-202ENST00000457422 COPS5Q92905 334 aa17.77■□□□□ 0.44
CCDC43-202ENST00000457422 OPTNQ96CV9 577 aa17.77■□□□□ 0.44
CCDC43-202ENST00000457422 DDX27Q96GQ7 796 aaKnown RBP17.77■□□□□ 0.44
CCDC43-202ENST00000457422 SPATA33Q96N06 139 aa17.77■□□□□ 0.44
CCDC43-202ENST00000457422 C11orf70Q9BRQ4 267 aa17.77■□□□□ 0.44
CCDC43-202ENST00000457422 TCHPQ9BT92 498 aa17.77■□□□□ 0.44
CCDC43-202ENST00000457422 MROH8Q9H579 483 aa17.77■□□□□ 0.44
CCDC43-202ENST00000457422 ADAM22Q9P0K1 906 aa17.77■□□□□ 0.44
CCDC43-202ENST00000457422 ATP8A1Q9Y2Q0 1164 aa17.77■□□□□ 0.44
CCDC43-202ENST00000457422 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.77■□□□□ 0.44
CCDC43-202ENST00000457422 SCINQ9Y6U3 715 aa17.77■□□□□ 0.44
CCDC43-202ENST00000457422 PASKQ96RG2 1323 aa17.77■□□□□ 0.43
CCDC43-202ENST00000457422 PSTPIP1O43586 416 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 ZEB2O60315 1214 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 OSBPP22059 807 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 ATP1A2P50993 1020 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 PLTPP55058 493 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 TTC19Q6DKK2 380 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-202ENST00000457422 CCDC105Q8IYK2 499 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 TRAPPC12Q8WVT3 735 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 FHDC1Q9C0D6 1143 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-202ENST00000457422 MTMR12Q9C0I1 747 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 EPB41L4BQ9H329 900 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 PABPC3Q9H361 631 aaKnown RBP17.76■□□□□ 0.43
CCDC43-202ENST00000457422 THAP12O43422 761 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 CST3P01034 146 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-202ENST00000457422 PDCLQ13371 301 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 MAMLD1Q13495 774 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 TMEM63BQ5T3F8 832 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 TSHZ1Q6ZSZ6 1077 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 DHX37Q8IY37 1157 aaKnown RBP17.76■□□□□ 0.43
CCDC43-202ENST00000457422 PTPRHQ9HD43 1115 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 MTRF1LQ9UGC7 380 aaKnown RBP17.76■□□□□ 0.43
CCDC43-202ENST00000457422 ZSWIM8A7E2V4 1837 aa17.76■□□□□ 0.43
CCDC43-202ENST00000457422 SRRM3A6NNA2 597 aaPredicted RBP17.75■□□□□ 0.43
CCDC43-202ENST00000457422 ECEL1O95672 775 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 MAN1A1P33908 653 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 PMS2P54278 862 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 LLGL1Q15334 1064 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 DUOXA2Q1HG44 320 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 SGO2Q562F6 1265 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 GPAT2Q6NUI2 795 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 ZNF606Q8WXB4 792 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 ART4Q93070 314 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 FAM212AQ96EL1 285 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 ZNF668Q96K58 619 aaPredicted RBP17.75■□□□□ 0.43
CCDC43-202ENST00000457422 CENPHQ9H3R5 247 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 FZD8Q9H461 694 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 SMARCAD1Q9H4L7 1026 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 ACKR2O00590 384 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 GJB1P08034 283 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 TFDP1Q14186 410 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms