RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 HOXA13P31271 388 aaPredicted RBP2.4□□□□□ -2.03
NEDD1-204ENST00000457368 PBX3P40426 434 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 NOVA1P51513 510 aaKnown RBP2.4□□□□□ -2.03
NEDD1-204ENST00000457368 EPHA4P54764 986 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 SATB1Q01826 763 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 DSC1Q08554 894 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 C19orf57Q0VDD7 668 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 CCINQ13939 588 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 LRRC32Q14392 662 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 GRM4Q14833 912 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 SWI5Q1ZZU3 235 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 UVSSAQ2YD98 709 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 C8orf34Q49A92 452 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 ARTNQ5T4W7 220 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 TSSK4Q6SA08 328 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 GLB1LQ6UWU2 654 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 ABHD15Q6UXT9 468 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 AGMOQ6ZNB7 445 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 PIP4P1Q86T03 277 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 C11orf74Q86VG3 221 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 IQCA1Q86XH1 822 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 MAP4K3Q8IVH8 894 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 ITPRIPQ8IWB1 547 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 FAM9BQ8IZU0 186 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 PI4K2BQ8TCG2 481 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 AUTS2Q8WXX7 1259 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 FGF13Q92913 245 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 PHKBQ93100 1093 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 SPACA7Q96KW9 195 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 SEC62Q99442 399 aaKnown RBP2.4□□□□□ -2.03
NEDD1-204ENST00000457368 MAP3K14Q99558 947 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 SCNM1Q9BWG6 230 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 CPVLQ9H3G5 476 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 MARCH5Q9NX47 278 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 SLC9A2Q9UBY0 812 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 EVLQ9UI08 416 aaPredicted RBP2.4□□□□□ -2.03
NEDD1-204ENST00000457368 CEP131Q9UPN4 1083 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 DMXL1Q9Y485 3027 aa2.4□□□□□ -2.03
NEDD1-204ENST00000457368 MIA3Q5JRA6 1907 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 CHURC1-FNTBB4DL54 471 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 KLRF2D3W0D1 207 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 ARNTLO00327 626 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 MMP20O60882 483 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 ALDH2P05091 517 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 PSAPP07602 524 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 MARK3P27448 753 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 FNTBP49356 437 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 GLUD2P49448 558 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 ACTR2P61160 394 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 ATP11AP98196 1134 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 SEC23AQ15436 765 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 TEAD4Q15561 434 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 AXDND1Q5T1B0 1012 aaPredicted RBP2.39□□□□□ -2.03
NEDD1-204ENST00000457368 FAM160B1Q5W0V3 765 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 RNF43Q68DV7 783 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 MFSD6Q6ZSS7 791 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 GET4Q7L5D6 327 aaPredicted RBP2.39□□□□□ -2.03
NEDD1-204ENST00000457368 TREML1Q86YW5 311 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 TBC1D10CQ8IV04 446 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 FTSJ3Q8IY81 847 aaKnown RBP2.39□□□□□ -2.03
NEDD1-204ENST00000457368 ENAHQ8N8S7 591 aaPredicted RBP2.39□□□□□ -2.03
NEDD1-204ENST00000457368 CNNM3Q8NE01 707 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 HELQQ8TDG4 1101 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 DEPDC1BQ8WUY9 529 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 PIK3R5Q8WYR1 880 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 UTP4Q969X6 686 aaKnown RBP2.39□□□□□ -2.03
NEDD1-204ENST00000457368 PGBD4Q96DM1 585 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 BBC3Q96PG8 261 aaPredicted RBP2.39□□□□□ -2.03
NEDD1-204ENST00000457368 OSMRQ99650 979 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 LPIN3Q9BQK8 851 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 C8orf33Q9H7E9 229 aaPredicted RBP2.39□□□□□ -2.03
NEDD1-204ENST00000457368 KAT14Q9H8E8 782 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 LY9Q9HBG7 655 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 MAD2L2Q9UI95 211 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 COL4A2P08572 1712 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 GREB1Q4ZG55 1949 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 A0A087WV48 116 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 SOWAHDA6NJG2 315 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 C9orf172C9J069 976 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 NT5C1B-RDH14C9J2C7 533 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 MAST4O15021 2626 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 SART1O43290 800 aaKnown RBP2.39□□□□□ -2.03
NEDD1-204ENST00000457368 TGM5O43548 720 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 GAS2O43903 313 aaKnown RBP2.39□□□□□ -2.03
NEDD1-204ENST00000457368 SORBS3O60504 671 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 B4GALT3O60512 393 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 DEAF1O75398 565 aaPredicted RBP2.39□□□□□ -2.03
NEDD1-204ENST00000457368 RFPL2O75678 378 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 PLA2G2AP14555 144 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 EPB42P16452 691 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 FCARP24071 287 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 ZNF76P36508 570 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 MPLP40238 635 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 GPC3P51654 580 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 IGBP1P78318 339 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 TMEM62Q0P6H9 643 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 MTMR1Q13613 665 aa2.39□□□□□ -2.03
NEDD1-204ENST00000457368 KARSQ15046 597 aaKnown RBP2.39□□□□□ -2.03
NEDD1-204ENST00000457368 SF3A2Q15428 464 aaKnown RBP2.39□□□□□ -2.03
NEDD1-204ENST00000457368 ZNF423Q2M1K9 1284 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms