RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 TNNI1P19237 187 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 FGFR3P22607 806 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 HOXD13P35453 343 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 LTBRP36941 435 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 MYBPC2Q14324 1141 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 COL19A1Q14993 1142 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 SNRNP35Q16560 246 aaKnown RBP13.31□□□□□ -0.28
C9orf139-201ENST00000457302 DUOXA2Q1HG44 320 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 ANKRD54Q6NXT1 300 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 METTL23Q86XA0 190 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 GLYCTKQ8IVS8 523 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 GUF1Q8N442 669 aaKnown RBP13.31□□□□□ -0.28
C9orf139-201ENST00000457302 KIAA0895Q8NCT3 520 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.31□□□□□ -0.28
C9orf139-201ENST00000457302 LNX1Q8TBB1 728 aaPredicted RBP13.31□□□□□ -0.28
C9orf139-201ENST00000457302 PIK3R5Q8WYR1 880 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 B3GALT6Q96L58 329 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 BARX2Q9UMQ3 279 aaPredicted RBP13.31□□□□□ -0.28
C9orf139-201ENST00000457302 MAPK8IP1Q9UQF2 711 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 ANK1P16157 1881 aa13.31□□□□□ -0.28
C9orf139-201ENST00000457302 DLL1O00548 723 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 MEFVO15553 781 aaPredicted RBP13.3□□□□□ -0.28
C9orf139-201ENST00000457302 EFEMP2O95967 443 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 NFICP08651 508 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 KRT19P08727 400 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 ELF1P32519 619 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 PPP1R2P41236 205 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 PNPLA4P41247 253 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 TAF6P49848 677 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 KCNQ1P51787 676 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 RBP5P82980 135 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 ITIH3Q06033 890 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 DLX2Q07687 328 aaPredicted RBP13.3□□□□□ -0.28
C9orf139-201ENST00000457302 RTP2Q5QGT7 225 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 ATAT1Q5SQI0 421 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 ZNF658Q5TYW1 1059 aaPredicted RBP13.3□□□□□ -0.28
C9orf139-201ENST00000457302 C9orf57Q5W0N0 161 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 PRSS55Q6UWB4 352 aaPredicted RBP13.3□□□□□ -0.28
C9orf139-201ENST00000457302 CBWD2Q8IUF1 395 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 C12orf56Q8IXR9 622 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 CSGALNACT2Q8N6G5 542 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 SLC22A17Q8WUG5 538 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 HDAC7Q8WUI4 952 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 SUSD3Q96L08 255 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 FBXL18Q96ME1 805 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 ZNF560Q96MR9 790 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 TSG101Q99816 390 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 OXCT2Q9BYC2 517 aaPredicted RBP13.3□□□□□ -0.28
C9orf139-201ENST00000457302 PLEKHA4Q9H4M7 779 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 PDE11AQ9HCR9 933 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 CLEC1BQ9P126 229 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 PCDHB8Q9UN66 801 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 PCDHA5Q9Y5H7 936 aa13.3□□□□□ -0.28
C9orf139-201ENST00000457302 GRXCR2A6NFK2 248 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 I3L4J1 428 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 PIRO00625 290 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 MBTPS2O43462 519 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 DLATP10515 647 aaKnown RBP13.29□□□□□ -0.28
C9orf139-201ENST00000457302 ODC1P11926 461 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 BMP1P13497 986 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 EPCAMP16422 314 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 RPL17P18621 184 aaKnown RBP13.29□□□□□ -0.28
C9orf139-201ENST00000457302 TKTP29401 623 aaKnown RBP13.29□□□□□ -0.28
C9orf139-201ENST00000457302 OR1D2P34982 312 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 CLCN4P51793 760 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 GUCY2FP51841 1108 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 LILRA4P59901 499 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 MYO1EQ12965 1108 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 ADAM9Q13443 819 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 SMAD4Q13485 552 aaKnown RBP13.29□□□□□ -0.28
C9orf139-201ENST00000457302 SV2CQ496J9 727 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 CTXN3Q4LDR2 81 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 VARS2Q5ST30 1063 aaKnown RBP13.29□□□□□ -0.28
C9orf139-201ENST00000457302 CEP135Q66GS9 1140 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 ZNF280DQ6N043 979 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 SLC9A9Q8IVB4 645 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 THEM5Q8N1Q8 247 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 C3orf58Q8NDZ4 430 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 ZSWIM2Q8NEG5 633 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 CCDC127Q96BQ5 260 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 RIPOR3Q96MK2 946 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 ITGA11Q9UKX5 1188 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 DSEQ9UL01 958 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 AGAP1Q9UPQ3 857 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 BACE2Q9Y5Z0 518 aa13.29□□□□□ -0.28
C9orf139-201ENST00000457302 M0QZQ0 153 aa13.28□□□□□ -0.28
C9orf139-201ENST00000457302 CETN3O15182 167 aa13.28□□□□□ -0.28
C9orf139-201ENST00000457302 PHACTR2O75167 634 aa13.28□□□□□ -0.28
C9orf139-201ENST00000457302 TBX10O75333 385 aa13.28□□□□□ -0.28
C9orf139-201ENST00000457302 CLSTN1O94985 981 aa13.28□□□□□ -0.28
C9orf139-201ENST00000457302 GLP2RO95838 553 aa13.28□□□□□ -0.28
C9orf139-201ENST00000457302 NR3C1P04150 777 aa13.28□□□□□ -0.28
C9orf139-201ENST00000457302 KRT13P13646 458 aa13.28□□□□□ -0.28
C9orf139-201ENST00000457302 AP3M2P53677 418 aa13.28□□□□□ -0.28
C9orf139-201ENST00000457302 ARPP19P56211 112 aa13.28□□□□□ -0.28
C9orf139-201ENST00000457302 YWHAHQ04917 246 aaPredicted RBP13.28□□□□□ -0.28
C9orf139-201ENST00000457302 TRPC3Q13507 836 aa13.28□□□□□ -0.28
C9orf139-201ENST00000457302 KCNC3Q14003 757 aa13.28□□□□□ -0.28
C9orf139-201ENST00000457302 PSMD6Q15008 389 aa13.28□□□□□ -0.28
C9orf139-201ENST00000457302 LIN9Q5TKA1 542 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms