RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 ANO9A1A5B4 782 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 PODXLO00592 558 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 PIRO00625 290 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 LILRB3O75022 631 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 TADA2AO75478 443 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 B3GAT3O94766 335 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 KIF4AO95239 1232 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 MBD3O95983 291 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 NUDT7P0C024 238 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 CCNE1P24864 410 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 GUCY2FP51841 1108 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 CYP24A1Q07973 514 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 TMEM132DQ14C87 1099 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 SURF1Q15526 300 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 EDRF1Q3B7T1 1238 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 PPP1R15BQ5SWA1 713 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 SCARA3Q6AZY7 606 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 FUT10Q6P4F1 479 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 ZC3H3Q8IXZ2 948 aaKnown RBP10.89□□□□□ -0.67
ATG4A-206ENST00000457035 VPS52Q8N1B4 723 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 C3orf58Q8NDZ4 430 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 CXorf38Q8TB03 319 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 PLEKHO2Q8TD55 490 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 NOC3LQ8WTT2 800 aaKnown RBP10.89□□□□□ -0.67
ATG4A-206ENST00000457035 TLR9Q9NR96 1032 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 CHST7Q9NS84 486 aa10.89□□□□□ -0.67
ATG4A-206ENST00000457035 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.89□□□□□ -0.67
ATG4A-206ENST00000457035 TRIM49BA6NDI0 452 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 PPEF2O14830 753 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 MAPK13O15264 365 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 XPOTO43592 962 aaKnown RBP10.88□□□□□ -0.67
ATG4A-206ENST00000457035 AKAP3O75969 853 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 CXCL14O95715 111 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 SOD2P04179 222 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 CTSAP10619 480 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 NR2F2P24468 414 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 RPL13P26373 211 aaKnown RBP10.88□□□□□ -0.67
ATG4A-206ENST00000457035 PPP1R2P41236 205 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 CLDN10P78369 228 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 TFF2Q03403 129 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 STIM1Q13586 685 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 PSMD6Q15008 389 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 KIAA0319Q5VV43 1072 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 C9orf57Q5W0N0 161 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 PDE12Q6L8Q7 609 aaKnown RBP10.88□□□□□ -0.67
ATG4A-206ENST00000457035 TMC7Q7Z402 723 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 MRPL43Q8N983 215 aaKnown RBP10.88□□□□□ -0.67
ATG4A-206ENST00000457035 BEST2Q8NFU1 509 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 MICAL1Q8TDZ2 1067 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 PARD3BQ8TEW8 1205 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 HASPINQ8TF76 798 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 CACTINQ8WUQ7 758 aaKnown RBP10.88□□□□□ -0.67
ATG4A-206ENST00000457035 ZNF516Q92618 1163 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 BORCS6Q96GS4 357 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 DOCK6Q96HP0 2047 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 FAM84AQ96KN4 292 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 UHRF1Q96T88 793 aaPredicted RBP10.88□□□□□ -0.67
ATG4A-206ENST00000457035 POP1Q99575 1024 aaKnown RBP10.88□□□□□ -0.67
ATG4A-206ENST00000457035 ZBP1Q9H171 429 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 NGRNQ9NPE2 291 aaKnown RBP10.88□□□□□ -0.67
ATG4A-206ENST00000457035 INTS13Q9NVM9 706 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 DPP3Q9NY33 737 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 STK39Q9UEW8 545 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 PCDHGC5Q9Y5F6 944 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 IRAK3Q9Y616 596 aa10.88□□□□□ -0.67
ATG4A-206ENST00000457035 PTPRJQ12913 1337 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 C2orf71A6NGG8 1288 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 HIDE1A8MVS5 230 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 PSMA7O14818 248 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 BRCC3P46736 316 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 LILRA4P59901 499 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 TFAMQ00059 246 aaKnown RBP10.87□□□□□ -0.67
ATG4A-206ENST00000457035 FKBP3Q00688 224 aaKnown RBP10.87□□□□□ -0.67
ATG4A-206ENST00000457035 DSG1Q02413 1049 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 LRRC63Q05C16 580 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 DUOXA2Q1HG44 320 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 USP41Q3LFD5 358 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 TIGD5Q53EQ6 642 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 TCEAL5Q5H9L2 206 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 CEP135Q66GS9 1140 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 LMBRD2Q68DH5 695 aaPredicted RBP10.87□□□□□ -0.67
ATG4A-206ENST00000457035 KLHL10Q6JEL2 608 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 TTI2Q6NXR4 508 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 FOXR2Q6PJQ5 311 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 ADGRD2Q7Z7M1 963 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 ZNF687Q8N1G0 1237 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 C1orf127Q8N9H9 656 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 MLKLQ8NB16 471 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 OR5B17Q8NGF7 314 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 NELFBQ8WX92 580 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 AUTS2Q8WXX7 1259 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 CCDC127Q96BQ5 260 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 EEF2KMTQ96G04 330 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 NECAB3Q96P71 396 aaPredicted RBP10.87□□□□□ -0.67
ATG4A-206ENST00000457035 MED15Q96RN5 788 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 DUSP9Q99956 384 aaKnown RBP10.87□□□□□ -0.67
ATG4A-206ENST00000457035 TCF25Q9BQ70 676 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 HERC2P3Q9BVR0 1158 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 KRTAP3-3Q9BYR6 98 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 KRTAP3-2Q9BYR7 98 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms