RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 PEX5P50542 639 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 ZBTB41Q5SVQ8 909 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 CCDC197Q8NCU1 140 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 TAS1R2Q8TE23 839 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 PARD3BQ8TEW8 1205 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 KIFAP3Q92845 792 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 COPS5Q92905 334 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 OPTNQ96CV9 577 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 CDHR1Q96JP9 859 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 KREMEN1Q96MU8 473 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 ZNF408Q9H9D4 720 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 ATP6V0A4Q9HBG4 840 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 RBPJLQ9UBG7 517 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 TRPC6Q9Y210 931 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 CCT8L1PA6NM43 557 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 TP73O15350 636 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 RIPK2O43353 540 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 SPOPO43791 374 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 FARP2O94887 1054 aaPredicted RBP13.25□□□□□ -0.29
LINC00959-201ENST00000456581 CYP2C8P10632 490 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 GJA5P36382 358 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 ACOT2P49753 483 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 ALCAMQ13740 583 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 KIF22Q14807 665 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 HOOK3Q86VS8 718 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 C12orf56Q8IXR9 622 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 FGD4Q96M96 766 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 NUP85Q9BW27 656 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 HAPLN2Q9GZV7 340 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 FGFR1OP2Q9NVK5 253 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 MYPNQ86TC9 1320 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 LRRIQ4A6NIV6 560 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 UBOX5O94941 541 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 GGPS1O95749 300 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 NUDT17P0C025 328 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 ELF1P32519 619 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 AUHQ13825 339 aaKnown RBP13.24□□□□□ -0.29
LINC00959-201ENST00000456581 HSDL1Q3SXM5 330 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 XKR3Q5GH77 459 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 EXOC3L1Q86VI1 746 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 ERO1BQ86YB8 467 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 DNERQ8NFT8 737 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 IWS1Q96ST2 819 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 NTPCRQ9BSD7 190 aaKnown RBP13.24□□□□□ -0.29
LINC00959-201ENST00000456581 NOD2Q9HC29 1040 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 MAFBQ9Y5Q3 323 aaPredicted RBP13.24□□□□□ -0.29
LINC00959-201ENST00000456581 OATP04181 439 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 GLRA2P23416 452 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 EPHX2P34913 555 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 MOGSQ13724 837 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 MYBPC2Q14324 1141 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 FBXO16Q8IX29 292 aaPredicted RBP13.24□□□□□ -0.29
LINC00959-201ENST00000456581 ANKRD13AQ8IZ07 590 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 AAASQ9NRG9 546 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 CHST7Q9NS84 486 aa13.24□□□□□ -0.29
LINC00959-201ENST00000456581 RASGRF2O14827 1237 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 ATP6V1G2O95670 118 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 HARSP12081 509 aaKnown RBP13.23□□□□□ -0.29
LINC00959-201ENST00000456581 TCF7P36402 384 aaPredicted RBP13.23□□□□□ -0.29
LINC00959-201ENST00000456581 RNASELQ05823 741 aaKnown RBP13.23□□□□□ -0.29
LINC00959-201ENST00000456581 CETN1Q12798 172 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 MYO1EQ12965 1108 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 SIX1Q15475 284 aaPredicted RBP13.23□□□□□ -0.29
LINC00959-201ENST00000456581 GJC2Q5T442 439 aaPredicted RBP13.23□□□□□ -0.29
LINC00959-201ENST00000456581 EPS8L1Q8TE68 723 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 TIPINQ9BVW5 301 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 ACTR5Q9H9F9 607 aaPredicted RBP13.23□□□□□ -0.29
LINC00959-201ENST00000456581 ARHGAP28Q9P2N2 729 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 TCP11X1B4DZS4 312 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 GRIN3BO60391 1043 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 GJB1P08034 283 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 CTNNA2P26232 953 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 COILP38432 576 aaPredicted RBP13.23□□□□□ -0.29
LINC00959-201ENST00000456581 NLRP11P59045 1033 aaKnown RBP13.23□□□□□ -0.29
LINC00959-201ENST00000456581 GPC5P78333 572 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 XRCC4Q13426 336 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 HP1BP3Q5SSJ5 553 aaPredicted RBP13.23□□□□□ -0.29
LINC00959-201ENST00000456581 WLSQ5T9L3 541 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 SV2AQ7L0J3 742 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 CYP4X1Q8N118 509 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 MCPH1Q8NEM0 835 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 GIMAP7Q8NHV1 300 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 ZNF564Q8TBZ8 553 aaPredicted RBP13.23□□□□□ -0.29
LINC00959-201ENST00000456581 TRAPPC12Q8WVT3 735 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 HEMGNQ9BXL5 484 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 PORCNQ9H237 461 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 CDC42EP4Q9H3Q1 356 aaKnown RBP13.23□□□□□ -0.29
LINC00959-201ENST00000456581 PDGFCQ9NRA1 345 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 GGA2Q9UJY4 613 aa13.23□□□□□ -0.29
LINC00959-201ENST00000456581 PTPRJQ12913 1337 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 SPDYE5A6NIY4 337 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 CETPP11597 493 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 ICAM3P32942 547 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 EIF3BP55884 814 aaKnown RBP13.22□□□□□ -0.29
LINC00959-201ENST00000456581 DHX34Q14147 1143 aaKnown RBP13.22□□□□□ -0.29
LINC00959-201ENST00000456581 PLCB4Q15147 1175 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 UBL4BQ8N7F7 174 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 ZNF516Q92618 1163 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 ZNF653Q96CK0 615 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 IFT74Q96LB3 600 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms