RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 GRID2IPA4D2P6 1211 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 DDX39AO00148 427 aaKnown RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 EYA4O95677 639 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 MYCLP12524 364 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 CPA3P15088 417 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 ECHS1P30084 290 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 CTNNA1P35221 906 aaKnown RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 CCNFP41002 786 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 MMP13P45452 471 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 PDE1BQ01064 536 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 TTLL12Q14166 644 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 EPHA7Q15375 998 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 ADRM1Q16186 407 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 PUS10Q3MIT2 529 aaKnown RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 HERC4Q5GLZ8 1057 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 SPDYCQ5MJ68 293 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 FKBP15Q5T1M5 1219 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 TREML2Q5T2D2 321 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 RSPH3Q86UC2 560 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 NME8Q8N427 588 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 GLIS3Q8NEA6 775 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 ANKK1Q8NFD2 765 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 DQX1Q8TE96 717 aaKnown RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 HAUS1Q96CS2 278 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 CDCA5Q96FF9 252 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 EEF2KMTQ96G04 330 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 PDCD2LQ9BRP1 358 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 EIF2AQ9BY44 585 aaKnown RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 LRMDAQ9H2I8 198 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 ELP3Q9H9T3 547 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 DDX43Q9NXZ2 648 aaKnown RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 STOML1Q9UBI4 398 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 LCTP09848 1927 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 WDR81Q562E7 1941 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 A0A0G2JMZ2 1700 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 ESYT3A0FGR9 886 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 CCDC162PA2VCL2 907 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 ZSCAN5CA6NGD5 496 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-218ENST00000456174 GLTPD2A6NH11 291 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 DCDC2CA8MYV0 355 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 STRNO43815 780 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 SUN1O94901 812 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 PABPC4LP0CB38 370 aaKnown RBP8.11□□□□□ -1.11
HDAC9-218ENST00000456174 POTEJP0CG39 1038 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 CHN1P15882 459 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 MUTP22033 750 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 CA8P35219 290 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 ACADVLP49748 655 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 PDE6CP51160 858 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 ADARP55265 1226 aaKnown RBP8.11□□□□□ -1.11
HDAC9-218ENST00000456174 MTMR1Q13613 665 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 SPIDRQ14159 915 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 GIT2Q14161 759 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 CFAP221Q4G0U5 840 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 NFRKBQ6P4R8 1299 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 B3GNT9Q6UX72 402 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 PACS1Q6VY07 963 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 OR2W6PQ8NHA6 318 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 NAT14Q8WUY8 206 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 OTUD5Q96G74 571 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 NUDCD1Q96RS6 583 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 CGREF1Q99674 301 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 HNRNPABQ99729 332 aaKnown RBP8.11□□□□□ -1.11
HDAC9-218ENST00000456174 REEP2Q9BRK0 252 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 DPH5Q9H2P9 285 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 EPB41L1Q9H4G0 881 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 ZHX3Q9H4I2 956 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 AGO4Q9HCK5 861 aaKnown RBP8.11□□□□□ -1.11
HDAC9-218ENST00000456174 QPCTLQ9NXS2 382 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 CAPN11Q9UMQ6 739 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 LUC7L2Q9Y383 392 aaKnown RBP8.11□□□□□ -1.11
HDAC9-218ENST00000456174 PCDHA2Q9Y5H9 948 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 DOCK5Q9H7D0 1870 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 A0A1W2PQC6 194 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 KANSL1LA0AUZ9 987 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 TTC26A0AVF1 554 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 ZBTB39O15060 712 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 DHX15O43143 795 aaKnown RBP8.11□□□□□ -1.11
HDAC9-218ENST00000456174 ATP5HO75947 161 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 UNC5CO95185 931 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 ASMTLO95671 621 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 SHBGP04278 402 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 VAV1P15498 845 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 GM2AP17900 193 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 CDK7P50613 346 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 CCT8P50990 548 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 EIF3BP55884 814 aaKnown RBP8.11□□□□□ -1.11
HDAC9-218ENST00000456174 UBXN1Q04323 297 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 LRRC63Q05C16 580 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 PPATQ06203 517 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 MKRN3Q13064 507 aaKnown RBP8.11□□□□□ -1.11
HDAC9-218ENST00000456174 INAQ16352 499 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 EAPPQ56P03 285 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-218ENST00000456174 ZNF362Q5T0B9 420 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-218ENST00000456174 NEPROQ6NW34 567 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 GADL1Q6ZQY3 521 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 MOB2Q70IA6 237 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 MIER3Q7Z3K6 550 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 ERO1BQ86YB8 467 aa8.11□□□□□ -1.11
HDAC9-218ENST00000456174 CXorf38Q8TB03 319 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms