RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 IKBKBO14920 756 aa4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 HTRA2O43464 458 aaPredicted RBP4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 GPANK1O95872 356 aa4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 RPLP2P05387 115 aaKnown RBP4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 HKR1P10072 659 aa4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 MTHFD1P11586 935 aaKnown RBP4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 FGFR4P22455 802 aa4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 KIF23Q02241 960 aaPredicted RBP4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 OCA2Q04671 838 aa4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 TARDBPQ13148 414 aaKnown RBP eCLIP4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 B3GNTL1Q67FW5 361 aaPredicted RBP4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 BEND2Q8NDZ0 799 aa4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 NUP133Q8WUM0 1156 aa4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 CAVIN3Q969G5 261 aa4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 BOD1Q96IK1 185 aa4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 ZSWIM1Q9BR11 485 aa4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 GALNT9Q9HCQ5 603 aa4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 KCNE5Q9UJ90 142 aa4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 LIMCH1Q9UPQ0 1083 aa4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 IPPQ9Y573 584 aa4.83□□□□□ -1.64
R3HDM1-212ENST00000456040 TNKSO95271 1327 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 CCDC154A6NI56 674 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 HAUS5O94927 633 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 PRSS23O95084 383 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 EGR2P11161 476 aaPredicted RBP4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 IBSPP21815 317 aaPredicted RBP4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 ELLP55199 621 aaPredicted RBP4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 ADKP55263 362 aaKnown RBP4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 CXADRP78310 365 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 HSD11B2P80365 405 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 RAB39AQ14964 217 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 FBXO42Q6P3S6 717 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 TBC1D15Q8TC07 691 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 IFI44Q8TCB0 444 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 RAB24Q969Q5 203 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 COA7Q96BR5 231 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 RNF31Q96EP0 1072 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 PNKPQ96T60 521 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 BRINP2Q9C0B6 783 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 SYNPO2LQ9H987 977 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 TMEM74BQ9NUR3 256 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 SYBUQ9NX95 663 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 USP25Q9UHP3 1055 aa4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 MTO1Q9Y2Z2 717 aaKnown RBP4.82□□□□□ -1.64
R3HDM1-212ENST00000456040 AATKQ6ZMQ8 1374 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 CDHR4A6H8M9 788 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 GRM6O15303 877 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 ERN1O75460 977 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 C1RP00736 705 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 ITGAMP11215 1152 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 EDNRBP24530 442 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 IL10RAQ13651 578 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 PTPROQ16827 1216 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 UAP1L1Q3KQV9 507 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 C3orf36Q3SXR2 165 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 PABPC1LQ4VXU2 614 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 GADL1Q6ZQY3 521 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 DCBLD1Q8N8Z6 715 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 IL17RDQ8NFM7 739 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 ASB10Q8WXI3 467 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 LINC00476Q8WZB0 136 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 MARS2Q96GW9 593 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 CLPTM1LQ96KA5 538 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 MED15Q96RN5 788 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 SMAD5Q99717 465 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 HOMER2Q9NSB8 354 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 CALCOCO1Q9P1Z2 691 aa4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 TESQ9UGI8 421 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-212ENST00000456040 FDXRP22570 491 aa4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 NOMO3P69849 1222 aa4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 ODF1Q14990 250 aa4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 NOMO2Q5JPE7 1267 aa4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 GPR149Q86SP6 731 aa4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 TTC7BQ86TV6 843 aa4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 COLGALT2Q8IYK4 626 aa4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 MIER2Q8N344 545 aa4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 FUBP1Q96AE4 644 aaKnown RBP4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 MRGPRX4Q96LA9 322 aa4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 SPATA5L1Q9BVQ7 753 aa4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 PACSIN1Q9BY11 444 aa4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 ASPSCR1Q9BZE9 553 aa4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 MAN1C1Q9NR34 630 aa4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 TBCCD1Q9NVR7 557 aa4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 CFAP20Q9Y6A4 193 aaKnown RBP4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 EPN1Q9Y6I3 576 aaPredicted RBP4.8□□□□□ -1.64
R3HDM1-212ENST00000456040 CCDC78A2IDD5 438 aa4.79□□□□□ -1.64
R3HDM1-212ENST00000456040 MYADML2A6NDP7 307 aa4.79□□□□□ -1.64
R3HDM1-212ENST00000456040 AGFG2O95081 481 aa4.79□□□□□ -1.64
R3HDM1-212ENST00000456040 SNUPNO95149 360 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-212ENST00000456040 ESRRBO95718 433 aa4.79□□□□□ -1.64
R3HDM1-212ENST00000456040 SLC6A4P31645 630 aa4.79□□□□□ -1.64
R3HDM1-212ENST00000456040 RECQLP46063 649 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-212ENST00000456040 SEC24CP53992 1094 aa4.79□□□□□ -1.64
R3HDM1-212ENST00000456040 ZNF280AP59817 542 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-212ENST00000456040 TLE1Q04724 770 aa4.79□□□□□ -1.64
R3HDM1-212ENST00000456040 CYP2A13Q16696 494 aa4.79□□□□□ -1.64
R3HDM1-212ENST00000456040 UTP14CQ5TAP6 766 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-212ENST00000456040 AOPEPQ8N6M6 819 aa4.79□□□□□ -1.64
R3HDM1-212ENST00000456040 SMG7Q92540 1137 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms