RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 TAF4BQ92750 862 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 UROC1Q96N76 676 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 SIX2Q9NPC8 291 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 AGAP1Q9UPQ3 857 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 H0YGN5 161 aa17.86■□□□□ 0.45
CCDC90B-202ENST00000455220 PPEF2O14830 753 aa17.86■□□□□ 0.45
CCDC90B-202ENST00000455220 KRT19P08727 400 aa17.86■□□□□ 0.45
CCDC90B-202ENST00000455220 RNASELQ05823 741 aaKnown RBP17.86■□□□□ 0.45
CCDC90B-202ENST00000455220 UPP1Q16831 310 aa17.86■□□□□ 0.45
CCDC90B-202ENST00000455220 SGSM1Q2NKQ1 1148 aa17.86■□□□□ 0.45
CCDC90B-202ENST00000455220 C9orf50Q5SZB4 431 aa17.86■□□□□ 0.45
CCDC90B-202ENST00000455220 SPECC1LQ69YQ0 1117 aa17.86■□□□□ 0.45
CCDC90B-202ENST00000455220 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.86■□□□□ 0.45
CCDC90B-202ENST00000455220 CMTR2Q8IYT2 770 aaKnown RBP17.86■□□□□ 0.45
CCDC90B-202ENST00000455220 DDX27Q96GQ7 796 aaKnown RBP17.86■□□□□ 0.45
CCDC90B-202ENST00000455220 LSM14BQ9BX40 385 aaKnown RBP17.86■□□□□ 0.45
CCDC90B-202ENST00000455220 CASTOR2A6NHX0 329 aa17.85■□□□□ 0.45
CCDC90B-202ENST00000455220 PODXLO00592 558 aa17.85■□□□□ 0.45
CCDC90B-202ENST00000455220 CLCNKBP51801 687 aa17.85■□□□□ 0.45
CCDC90B-202ENST00000455220 NOP14P78316 857 aaKnown RBP17.85■□□□□ 0.45
CCDC90B-202ENST00000455220 FIGNQ5HY92 759 aa17.85■□□□□ 0.45
CCDC90B-202ENST00000455220 FAM117BQ6P1L5 589 aa17.85■□□□□ 0.45
CCDC90B-202ENST00000455220 HERC6Q8IVU3 1022 aa17.85■□□□□ 0.45
CCDC90B-202ENST00000455220 PAAF1Q9BRP4 392 aa17.85■□□□□ 0.45
CCDC90B-202ENST00000455220 PI4K2AQ9BTU6 479 aa17.85■□□□□ 0.45
CCDC90B-202ENST00000455220 IMPG2Q9BZV3 1241 aa17.85■□□□□ 0.45
CCDC90B-202ENST00000455220 GANQ9H2C0 597 aa17.85■□□□□ 0.45
CCDC90B-202ENST00000455220 NRDE2Q9H7Z3 1164 aa17.85■□□□□ 0.45
CCDC90B-202ENST00000455220 FBXL5Q9UKA1 691 aa17.85■□□□□ 0.45
CCDC90B-202ENST00000455220 RANBP2P49792 3224 aaKnown RBP17.85■□□□□ 0.45
CCDC90B-202ENST00000455220 NOL4O94818 638 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 ATP2A2P16615 1042 aaKnown RBP17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 PNPLA4P41247 253 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 MLLT1Q03111 559 aaPredicted RBP17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 SHHQ15465 462 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 ZNF699Q32M78 642 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 PAN2Q504Q3 1202 aaKnown RBP17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 WDR44Q5JSH3 913 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 KLHDC7AQ5VTJ3 777 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 HPDLQ96IR7 371 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 FAXDC2Q96IV6 333 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 ZNF560Q96MR9 790 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 NT5C1BQ96P26 610 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 FAM193BQ96PV7 902 aaPredicted RBP17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 YME1L1Q96TA2 773 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 TMEM175Q9BSA9 504 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 TTYH3Q9C0H2 523 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 CWH43Q9H720 699 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 APOBEC3GQ9HC16 384 aaKnown RBP17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 FAM207AQ9NSI2 230 aaPredicted RBP17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 CACNG4Q9UBN1 327 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 APEX2Q9UBZ4 518 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 R3HCC1Q9Y3T6 440 aaKnown RBP17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 DAAM1Q9Y4D1 1078 aa17.84■□□□□ 0.45
CCDC90B-202ENST00000455220 TMEM189-UBE2V1I3L0A0 370 aa17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 EPHB6O15197 1021 aa17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 APBA1Q02410 837 aa17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 MYO1EQ12965 1108 aa17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 SPOPLQ6IQ16 392 aa17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 PHLDB3Q6NSJ2 640 aa17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 CCDC150Q8NCX0 1101 aa17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 NEK11Q8NG66 645 aa17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 IQCDQ96DY2 449 aa17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 RNPC3Q96LT9 517 aaKnown RBP17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 PCMTD1Q96MG8 357 aaPredicted RBP17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 NUP58Q9BVL2 599 aa17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 HCSTQ9UBK5 93 aa17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 DNAJB4Q9UDY4 337 aa17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 INSL6Q9Y581 213 aa17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 NUB1Q9Y5A7 615 aa17.83■□□□□ 0.45
CCDC90B-202ENST00000455220 UCHL3P15374 230 aa17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 RFX1P22670 979 aa17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 PAX3P23760 479 aa17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 AARSP49588 968 aaKnown RBP eCLIP17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 TAF6P49848 677 aa17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 LILRA4P59901 499 aa17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 GCNT1Q02742 428 aa17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 BTG3Q14201 252 aaPredicted RBP17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 CD300LGQ6UXG3 332 aa17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 ARHGEF19Q8IW93 802 aa17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 C3orf58Q8NDZ4 430 aa17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 SP7Q8TDD2 431 aaPredicted RBP17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 TATDN2Q93075 761 aa17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 RAD9AQ99638 391 aa17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 NAA15Q9BXJ9 866 aaKnown RBP17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 UBE2OQ9C0C9 1292 aaKnown RBP17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.83■□□□□ 0.44
CCDC90B-202ENST00000455220 LAMA2P24043 3122 aaKnown RBP17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 SPTLC1O15269 473 aa17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 TRIM21P19474 475 aaKnown RBP17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 BMP8BP34820 402 aa17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 LRMPQ12912 555 aa17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 TBX2Q13207 712 aaPredicted RBP17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 TRIM14Q14142 442 aa17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 SV2CQ496J9 727 aa17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 ZNF667Q5HYK9 610 aa17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 DCLRE1AQ6PJP8 1040 aa17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 TMC6Q7Z403 805 aa17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 ANP32BQ92688 251 aaKnown RBP17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 ELMO3Q96BJ8 720 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms