RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 PARVGQ9HBI0 331 aa20.18■□□□□ 0.82
UBE2D4-208ENST00000454350 KCNH3Q9ULD8 1083 aa20.18■□□□□ 0.82
UBE2D4-208ENST00000454350 NUB1Q9Y5A7 615 aa20.18■□□□□ 0.82
UBE2D4-208ENST00000454350 A0A0B4J269 797 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 LACTBL1A8MY62 500 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 M0QZQ0 153 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 NRG2O14511 850 aaPredicted RBP20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 RHOP08100 348 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 NBL1P41271 181 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 GPC5P78333 572 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 GTF2BQ00403 316 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 RESTQ13127 1097 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 MYCT1Q8N699 235 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 DTWD2Q8NBA8 298 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 TBC1D17Q9HA65 648 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 DLGAP2Q9P1A6 1054 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 FBXO2Q9UK22 296 aaPredicted RBP20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 PCDHB8Q9UN66 801 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 PATJQ8NI35 1801 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 F5P12259 2224 aa20.17■□□□□ 0.82
UBE2D4-208ENST00000454350 COL4A2P08572 1712 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 VPS37CA5D8V6 355 aaPredicted RBP20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 H7C4K7 107 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 OGTO15294 1046 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 TRAK2O60296 914 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 FAM13AO94988 1023 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 VNN2O95498 520 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 CYP3A5P20815 502 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 SCP2P22307 547 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 NMT1P30419 496 aaKnown RBP20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 MCM4P33991 863 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 LIG4P49917 911 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 GUCY2FP51841 1108 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 CTXN3Q4LDR2 81 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 PRSS36Q5K4E3 855 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 SPECC1Q5M775 1068 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 PHLDB3Q6NSJ2 640 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 FAM173BQ6P4H8 233 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 ING5Q8WYH8 240 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 LARP4BQ92615 738 aaKnown RBP20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 BICD1Q96G01 975 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 ARHGEF3Q9NR81 526 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 GVINP1Q7Z2Y8 2422 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 SPTBN4Q9H254 2564 aa20.16■□□□□ 0.82
UBE2D4-208ENST00000454350 ANKRD63C9JTQ0 380 aa20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 K7ENM7 598 aa20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 HNRNPDLO14979 420 aaKnown RBP20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 GFRA3O60609 400 aa20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 OAZ2O95190 189 aa20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 DDIT3P35638 169 aa20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 ARPP19P56211 112 aa20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 TPGS2Q68CL5 300 aa20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 MTSS1LQ765P7 747 aa20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 MAP4K3Q8IVH8 894 aa20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 BEST2Q8NFU1 509 aa20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 KIF12Q96FN5 646 aa20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 ST6GALNAC4Q9H4F1 302 aa20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 CPSF3Q9UKF6 684 aaKnown RBP20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 UBQLN1Q9UMX0 589 aaKnown RBP20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 INSL5Q9Y5Q6 135 aa20.15■□□□□ 0.82
UBE2D4-208ENST00000454350 TISP43B9A030 160 aa20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 PPEF2O14830 753 aa20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 CEBPBP17676 345 aa20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 SYT1P21579 422 aa20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 CCR2P41597 374 aa20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 MATR3P43243 847 aaKnown RBP eCLIP20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 STARD6P59095 220 aa20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 ZC2HC1CQ53FD0 456 aaPredicted RBP20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 ZNF280DQ6N043 979 aa20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 ASCL5Q7RTU5 278 aa20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 APPL2Q8NEU8 664 aa20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 IKZF4Q9H2S9 585 aa20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 CYP4F11Q9HBI6 524 aa20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 AFF4Q9UHB7 1163 aaKnown RBP20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 MRPS23Q9Y3D9 190 aaKnown RBP20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 SRPRBQ9Y5M8 271 aaKnown RBP20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 STYXL1Q9Y6J8 313 aa20.14■□□□□ 0.81
UBE2D4-208ENST00000454350 WDR87Q6ZQQ6 2873 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 PRRG1O14668 218 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 PPP1R37O75864 691 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 GLULP15104 373 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 PTPN2P17706 415 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 MARCKSP29966 332 aaPredicted RBP20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 PPP2R3AQ06190 1150 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 KYAT1Q16773 422 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 SPATA1Q5VX52 437 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 RNF19BQ6ZMZ0 732 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 TCEAL4Q96EI5 215 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 CLIC6Q96NY7 704 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 KXD1Q9BQD3 176 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 DDX23Q9BUQ8 820 aaKnown RBP20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 STRA6Q9BX79 667 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 PLA2G2FQ9BZM2 168 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 CEP72Q9P209 647 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 TIMM13Q9Y5L4 95 aaPredicted RBP20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 DENND4CQ5VZ89 1909 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 TICRRQ7Z2Z1 1910 aa20.13■□□□□ 0.81
UBE2D4-208ENST00000454350 EP300Q09472 2414 aaPredicted RBP20.12■□□□□ 0.81
UBE2D4-208ENST00000454350 MOSPD3O75425 235 aa20.12■□□□□ 0.81
UBE2D4-208ENST00000454350 LRG1P02750 347 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms