RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 AFMP43652 599 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 TRPC1P48995 793 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 CCR9P51686 369 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 SMAD3P84022 425 aaKnown RBP4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 CHAF1BQ13112 559 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 SLC12A1Q13621 1099 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 EIF4A2Q14240 407 aaKnown RBP4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 KCNB1Q14721 858 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 ANKRD1Q15327 319 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 ANKDD1AQ495B1 522 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 VWA3BQ502W6 1294 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 KDELC1Q6UW63 502 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 CCBE1Q6UXH8 406 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 RIOX2Q8IUF8 465 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 SIRT2Q8IXJ6 389 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 RPAP2Q8IXW5 612 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 PPIL6Q8IXY8 311 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 MARCH10Q8NA82 808 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 DTWD2Q8NBA8 298 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 TTLL11Q8NHH1 800 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 ZNF606Q8WXB4 792 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 CALML4Q96GE6 196 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 CCDC74BQ96LY2 380 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 PPP1R9BQ96SB3 815 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 POLR3CQ9BUI4 534 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 ACAT2Q9BWD1 397 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 SYNCQ9H7C4 482 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 C14orf93Q9H972 538 aaKnown RBP4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 ARMT1Q9H993 441 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 CARS2Q9HA77 564 aaKnown RBP4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 GP6Q9HCN6 339 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 FANCFQ9NPI8 374 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 EDARQ9UNE0 448 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 SPO11Q9Y5K1 396 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 NR2E3Q9Y5X4 410 aa4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 TDRD9Q8NDG6 1382 aaKnown RBP4.87□□□□□ -1.63
HMGB3P21-201ENST00000452483 A0A0B4J269 797 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 AQP12BA6NM10 295 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 NT5C1B-RDH14C9J2C7 533 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 GTPBP1O00178 669 aaKnown RBP4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 ARHGAP6O43182 974 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 STAM2O75886 525 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 TSPAN9O75954 239 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 TMEM63AO94886 807 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 YBX3P16989 372 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 HLA-DPA1P20036 260 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 NNMTP40261 264 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 ALDH3A2P51648 485 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 SLC5A3P53794 718 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 NLRP5P59047 1200 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 RAB1AP62820 205 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 TFCP2Q12800 502 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 BFSP1Q12934 665 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 SNAPC2Q13487 334 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 AUHQ13825 339 aaKnown RBP4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 COG2Q14746 738 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 FSCN1Q16658 493 aaKnown RBP4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 ATP2B3Q16720 1220 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 WSCD2Q2TBF2 565 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 CTXN3Q4LDR2 81 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 ANKRD39Q53RE8 183 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 NOL9Q5SY16 702 aaKnown RBP4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 SULT6B1Q6IMI4 303 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 DENND5AQ6IQ26 1287 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 SLC22A25Q6T423 547 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 NUP54Q7Z3B4 507 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 PRPF39Q86UA1 669 aaKnown RBP4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 RAB11FIP4Q86YS3 637 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 IQCF2Q8IXL9 164 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 KCTD6Q8NC69 237 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 ZNF540Q8NDQ6 660 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 GDAP1Q8TB36 358 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 BAHD1Q8TBE0 780 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 PANK1Q8TE04 598 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 AFG1LQ8WV93 481 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 GIMAP1Q8WWP7 306 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 ASIC4Q96FT7 647 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 NOX5Q96PH1 765 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 ELF4Q99607 663 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 HGH1Q9BTY7 390 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 ASPNQ9BXN1 380 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 PCIF1Q9H4Z3 704 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 SUDS3Q9H7L9 328 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 ZMAT3Q9HA38 289 aaKnown RBP4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 SP110Q9HB58 689 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 SAYSD1Q9NPB0 183 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 GJB4Q9NTQ9 266 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 INTS10Q9NVR2 710 aaKnown RBP4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 USP36Q9P275 1121 aaKnown RBP4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 PCSK1NQ9UHG2 260 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 FEM1BQ9UK73 627 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 FAM184BQ9ULE4 1060 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 COG5Q9UP83 839 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 CNPY2Q9Y2B0 182 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 GPR55Q9Y2T6 319 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 ATAD2BQ9ULI0 1458 aa4.86□□□□□ -1.63
HMGB3P21-201ENST00000452483 A0A1W2PPL8 197 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 HMX3A6NHT5 357 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 CCDC154A6NI56 674 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms