RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 SPIRE2Q8WWL2 714 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 ELSPBP1Q96BH3 223 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 SUSD3Q96L08 255 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 NTPCRQ9BSD7 190 aaKnown RBP11.91□□□□□ -0.5
USP1-204ENST00000452143 TCHPQ9BT92 498 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 RUSC1Q9BVN2 902 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 TARS2Q9BW92 718 aaKnown RBP11.91□□□□□ -0.5
USP1-204ENST00000452143 POLD4Q9HCU8 107 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 SPATA6Q9NWH7 488 aaPredicted RBP11.91□□□□□ -0.5
USP1-204ENST00000452143 KCND2Q9NZV8 630 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 MRPS17Q9Y2R5 130 aaKnown RBP11.91□□□□□ -0.5
USP1-204ENST00000452143 PCDHB6Q9Y5E3 794 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 PCDHGA2Q9Y5H1 932 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 INSL5Q9Y5Q6 135 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 TICRRQ7Z2Z1 1910 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 FAM170BA6NMN3 283 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 LRRN2O75325 713 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 CEBPBP17676 345 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 RPS9P46781 194 aaKnown RBP11.9□□□□□ -0.5
USP1-204ENST00000452143 TOB1P50616 345 aaPredicted RBP11.9□□□□□ -0.5
USP1-204ENST00000452143 SMTNP53814 917 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 STRN3Q13033 797 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 PRSS36Q5K4E3 855 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 ZBTB41Q5SVQ8 909 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 HYIQ5T013 277 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 ZPBP2Q6X784 338 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 ZNF852Q6ZMS4 543 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 DTHD1Q6ZMT9 781 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 C1orf186Q6ZWK4 172 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 ELMOD1Q8N336 334 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 LEMD2Q8NC56 503 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 APPL2Q8NEU8 664 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 CLDN23Q96B33 292 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 HINFPQ9BQA5 517 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 OXCT2Q9BYC2 517 aaPredicted RBP11.9□□□□□ -0.5
USP1-204ENST00000452143 CYP4F11Q9HBI6 524 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 ANKFY1Q9P2R3 1169 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 FBXL5Q9UKA1 691 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 KIF3AQ9Y496 699 aa11.9□□□□□ -0.5
USP1-204ENST00000452143 NUP210Q8TEM1 1887 aaPredicted RBP11.89□□□□□ -0.51
USP1-204ENST00000452143 TSC2P49815 1807 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 PP2D1A8MPX8 630 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 H0YCG3 227 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 PLS3P13797 630 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 FCARP24071 287 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 TARSP26639 723 aaKnown RBP11.89□□□□□ -0.51
USP1-204ENST00000452143 MCM4P33991 863 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 CTXN3Q4LDR2 81 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 RILPL1Q5EBL4 403 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 CYP4A22Q5TCH4 519 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 IQCEQ6IPM2 695 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 PDZD4Q76G19 769 aaPredicted RBP11.89□□□□□ -0.51
USP1-204ENST00000452143 SUMF1Q8NBK3 374 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 KCNN1Q92952 543 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 C18orf25Q96B23 403 aaPredicted RBP11.89□□□□□ -0.51
USP1-204ENST00000452143 MCRS1Q96EZ8 462 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 CORO1BQ9BR76 489 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 IER2Q9BTL4 223 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 MMTAG2Q9BU76 263 aaKnown RBP11.89□□□□□ -0.51
USP1-204ENST00000452143 PLEKHA5Q9HAU0 1116 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 ZFP14Q9HCL3 533 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 PRMT8Q9NR22 394 aaPredicted RBP11.89□□□□□ -0.51
USP1-204ENST00000452143 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.89□□□□□ -0.51
USP1-204ENST00000452143 HEBP1Q9NRV9 189 aa11.89□□□□□ -0.51
USP1-204ENST00000452143 AFF4Q9UHB7 1163 aaKnown RBP11.89□□□□□ -0.51
USP1-204ENST00000452143 MTF2Q9Y483 593 aaPredicted RBP11.89□□□□□ -0.51
USP1-204ENST00000452143 MAN2B1O00754 1011 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 SLC16A4O15374 487 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 CLDN3O15551 220 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 MEFVO15553 781 aaPredicted RBP11.88□□□□□ -0.51
USP1-204ENST00000452143 MAPTP10636 758 aaKnown RBP11.88□□□□□ -0.51
USP1-204ENST00000452143 HARSP12081 509 aaKnown RBP11.88□□□□□ -0.51
USP1-204ENST00000452143 SCP2P22307 547 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 EPHA5P54756 1037 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 ARPP19P56211 112 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 ATP2C1P98194 919 aaPredicted RBP11.88□□□□□ -0.51
USP1-204ENST00000452143 MCL1Q07820 350 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 ADCY1Q08828 1119 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 IL17AQ16552 155 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 KYAT1Q16773 422 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 SLC10A6Q3KNW5 377 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 TANGO2Q6ICL3 276 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 KCNK18Q7Z418 384 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 KIAA2013Q8IYS2 634 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 ZBTB44Q8NCP5 570 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 TMEM161BQ8NDZ6 487 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 DEPDC1BQ8WUY9 529 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 DDX12PQ92771 950 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 NELL1Q92832 810 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 IRF7Q92985 503 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 RMDN1Q96DB5 314 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 TBC1D32Q96NH3 1257 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 ASB16Q96NS5 453 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 FAM126AQ9BYI3 521 aaPredicted RBP11.88□□□□□ -0.51
USP1-204ENST00000452143 BRD9Q9H8M2 597 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 TRPV5Q9NQA5 729 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 ASAH2Q9NR71 780 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 LARSQ9P2J5 1176 aaKnown RBP11.88□□□□□ -0.51
USP1-204ENST00000452143 PCDHB8Q9UN66 801 aa11.88□□□□□ -0.51
USP1-204ENST00000452143 EPG5Q9HCE0 2579 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms