RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 PLEKHA5Q9HAU0 1116 aa23.54■■□□□ 1.36
C9orf3-208ENST00000451893 DOCK8Q8NF50 2099 aa23.53■■□□□ 1.36
C9orf3-208ENST00000451893 A0A1W2PQ27 194 aa23.53■■□□□ 1.36
C9orf3-208ENST00000451893 A0A1W2PQ64 194 aa23.53■■□□□ 1.36
C9orf3-208ENST00000451893 A0A1W2PQD8 194 aa23.53■■□□□ 1.36
C9orf3-208ENST00000451893 MRE11P49959 708 aa23.53■■□□□ 1.36
C9orf3-208ENST00000451893 SPAG1Q07617 926 aa23.53■■□□□ 1.36
C9orf3-208ENST00000451893 SLC10A6Q3KNW5 377 aa23.53■■□□□ 1.36
C9orf3-208ENST00000451893 CTXN3Q4LDR2 81 aa23.53■■□□□ 1.36
C9orf3-208ENST00000451893 RRAGBQ5VZM2 374 aa23.53■■□□□ 1.36
C9orf3-208ENST00000451893 ADALQ6DHV7 355 aa23.53■■□□□ 1.36
C9orf3-208ENST00000451893 ZNF280DQ6N043 979 aa23.53■■□□□ 1.36
C9orf3-208ENST00000451893 ATOH1Q92858 354 aaPredicted RBP23.53■■□□□ 1.36
C9orf3-208ENST00000451893 MSTO1Q9BUK6 570 aa23.53■■□□□ 1.36
C9orf3-208ENST00000451893 CCSER1Q9C0I3 900 aa23.53■■□□□ 1.36
C9orf3-208ENST00000451893 BLOC1S4Q9NUP1 217 aa23.53■■□□□ 1.36
C9orf3-208ENST00000451893 UBQLN1Q9UMX0 589 aaKnown RBP23.53■■□□□ 1.36
C9orf3-208ENST00000451893 NARSO43776 548 aaKnown RBP23.52■■□□□ 1.36
C9orf3-208ENST00000451893 ME1P48163 572 aa23.52■■□□□ 1.36
C9orf3-208ENST00000451893 NUBP1P53384 320 aa23.52■■□□□ 1.36
C9orf3-208ENST00000451893 NTHL1P78549 312 aa23.52■■□□□ 1.36
C9orf3-208ENST00000451893 PABPC1LQ4VXU2 614 aaKnown RBP23.52■■□□□ 1.36
C9orf3-208ENST00000451893 RTL10Q7L3V2 364 aa23.52■■□□□ 1.36
C9orf3-208ENST00000451893 ELMOD1Q8N336 334 aa23.52■■□□□ 1.36
C9orf3-208ENST00000451893 STK17AQ9UEE5 414 aa23.52■■□□□ 1.36
C9orf3-208ENST00000451893 TUBGCP4Q9UGJ1 667 aa23.52■■□□□ 1.36
C9orf3-208ENST00000451893 CDH7Q9ULB5 785 aa23.52■■□□□ 1.36
C9orf3-208ENST00000451893 DOCK6Q96HP0 2047 aa23.52■■□□□ 1.36
C9orf3-208ENST00000451893 OGTO15294 1046 aa23.51■■□□□ 1.35
C9orf3-208ENST00000451893 CPB1P15086 417 aa23.51■■□□□ 1.35
C9orf3-208ENST00000451893 IGFBP6P24592 240 aaPredicted RBP23.51■■□□□ 1.35
C9orf3-208ENST00000451893 ROR1Q01973 937 aa23.51■■□□□ 1.35
C9orf3-208ENST00000451893 PTPAQ15257 358 aa23.51■■□□□ 1.35
C9orf3-208ENST00000451893 DSTYKQ6XUX3 929 aa23.51■■□□□ 1.35
C9orf3-208ENST00000451893 MTSS1LQ765P7 747 aa23.51■■□□□ 1.35
C9orf3-208ENST00000451893 DYMQ7RTS9 669 aa23.51■■□□□ 1.35
C9orf3-208ENST00000451893 USP37Q86T82 979 aa23.51■■□□□ 1.35
C9orf3-208ENST00000451893 SLC44A3Q8N4M1 653 aa23.51■■□□□ 1.35
C9orf3-208ENST00000451893 EPSTI1Q96J88 318 aa23.51■■□□□ 1.35
C9orf3-208ENST00000451893 CYP4F11Q9HBI6 524 aa23.51■■□□□ 1.35
C9orf3-208ENST00000451893 CA14Q9ULX7 337 aa23.51■■□□□ 1.35
C9orf3-208ENST00000451893 LETM1O95202 739 aaPredicted RBP23.5■■□□□ 1.35
C9orf3-208ENST00000451893 SRFP11831 508 aa23.5■■□□□ 1.35
C9orf3-208ENST00000451893 NMT1P30419 496 aaKnown RBP23.5■■□□□ 1.35
C9orf3-208ENST00000451893 TNFSF9P41273 254 aa23.5■■□□□ 1.35
C9orf3-208ENST00000451893 CLCN5P51795 746 aa23.5■■□□□ 1.35
C9orf3-208ENST00000451893 CD300LGQ6UXG3 332 aa23.5■■□□□ 1.35
C9orf3-208ENST00000451893 SV2BQ7L1I2 683 aa23.5■■□□□ 1.35
C9orf3-208ENST00000451893 ST13P5Q8NFI4 369 aaPredicted RBP23.5■■□□□ 1.35
C9orf3-208ENST00000451893 BEST2Q8NFU1 509 aa23.5■■□□□ 1.35
C9orf3-208ENST00000451893 ZNF461Q8TAF7 563 aa23.5■■□□□ 1.35
C9orf3-208ENST00000451893 SUSD3Q96L08 255 aa23.5■■□□□ 1.35
C9orf3-208ENST00000451893 MRPS23Q9Y3D9 190 aaKnown RBP23.5■■□□□ 1.35
C9orf3-208ENST00000451893 NUMBLQ9Y6R0 609 aa23.5■■□□□ 1.35
C9orf3-208ENST00000451893 GALR2O43603 387 aaPredicted RBP23.49■■□□□ 1.35
C9orf3-208ENST00000451893 PAPLNO95428 1278 aa23.49■■□□□ 1.35
C9orf3-208ENST00000451893 ZNF131P52739 623 aa23.49■■□□□ 1.35
C9orf3-208ENST00000451893 TCF15Q12870 199 aa23.49■■□□□ 1.35
C9orf3-208ENST00000451893 RSPO2Q6UXX9 243 aaPredicted RBP23.49■■□□□ 1.35
C9orf3-208ENST00000451893 TMEM105Q8N8V8 129 aa23.49■■□□□ 1.35
C9orf3-208ENST00000451893 DDX12PQ92771 950 aa23.49■■□□□ 1.35
C9orf3-208ENST00000451893 RTP3Q9BQQ7 232 aa23.49■■□□□ 1.35
C9orf3-208ENST00000451893 WNT16Q9UBV4 365 aa23.49■■□□□ 1.35
C9orf3-208ENST00000451893 FBXL5Q9UKA1 691 aa23.49■■□□□ 1.35
C9orf3-208ENST00000451893 PCDHB8Q9UN66 801 aa23.49■■□□□ 1.35
C9orf3-208ENST00000451893 PCDHA7Q9UN72 937 aa23.49■■□□□ 1.35
C9orf3-208ENST00000451893 SRPRBQ9Y5M8 271 aaKnown RBP23.49■■□□□ 1.35
C9orf3-208ENST00000451893 LACTBL1A8MY62 500 aa23.48■■□□□ 1.35
C9orf3-208ENST00000451893 H0Y858 1186 aa23.48■■□□□ 1.35
C9orf3-208ENST00000451893 CUTAO60888 179 aa23.48■■□□□ 1.35
C9orf3-208ENST00000451893 STAT6P42226 847 aa23.48■■□□□ 1.35
C9orf3-208ENST00000451893 YWHAHQ04917 246 aaPredicted RBP23.48■■□□□ 1.35
C9orf3-208ENST00000451893 SLFN12LQ6IEE8 588 aa23.48■■□□□ 1.35
C9orf3-208ENST00000451893 SLC8B1Q6J4K2 584 aa23.48■■□□□ 1.35
C9orf3-208ENST00000451893 CCDC73Q6ZRK6 1079 aa23.48■■□□□ 1.35
C9orf3-208ENST00000451893 CD302Q8IX05 232 aa23.48■■□□□ 1.35
C9orf3-208ENST00000451893 ING5Q8WYH8 240 aa23.48■■□□□ 1.35
C9orf3-208ENST00000451893 FGF13Q92913 245 aa23.48■■□□□ 1.35
C9orf3-208ENST00000451893 CLIC6Q96NY7 704 aa23.48■■□□□ 1.35
C9orf3-208ENST00000451893 MRPL44Q9H9J2 332 aaKnown RBP23.48■■□□□ 1.35
C9orf3-208ENST00000451893 FAM86C1Q9NVL1 165 aa23.48■■□□□ 1.35
C9orf3-208ENST00000451893 HCFC1R1Q9NWW0 138 aa23.48■■□□□ 1.35
C9orf3-208ENST00000451893 FBXO2Q9UK22 296 aaPredicted RBP23.48■■□□□ 1.35
C9orf3-208ENST00000451893 TTC26A0AVF1 554 aa23.47■■□□□ 1.35
C9orf3-208ENST00000451893 WDR27A2RRH5 827 aa23.47■■□□□ 1.35
C9orf3-208ENST00000451893 PIGRP01833 764 aa23.47■■□□□ 1.35
C9orf3-208ENST00000451893 POU2F2P09086 479 aa23.47■■□□□ 1.35
C9orf3-208ENST00000451893 IDEP14735 1019 aa23.47■■□□□ 1.35
C9orf3-208ENST00000451893 PTPN2P17706 415 aa23.47■■□□□ 1.35
C9orf3-208ENST00000451893 CYP3A5P20815 502 aa23.47■■□□□ 1.35
C9orf3-208ENST00000451893 HTR4Q13639 388 aa23.47■■□□□ 1.35
C9orf3-208ENST00000451893 TPGS2Q68CL5 300 aa23.47■■□□□ 1.35
C9orf3-208ENST00000451893 IQCEQ6IPM2 695 aa23.47■■□□□ 1.35
C9orf3-208ENST00000451893 CAVIN1Q6NZI2 390 aaKnown RBP23.47■■□□□ 1.35
C9orf3-208ENST00000451893 MAP4K3Q8IVH8 894 aa23.47■■□□□ 1.35
C9orf3-208ENST00000451893 LRRC15Q8TF66 581 aa23.47■■□□□ 1.35
C9orf3-208ENST00000451893 TSPAN18Q96SJ8 248 aa23.47■■□□□ 1.35
C9orf3-208ENST00000451893 HAPLN2Q9GZV7 340 aa23.47■■□□□ 1.35
C9orf3-208ENST00000451893 DNMT3BQ9UBC3 853 aaKnown RBP23.47■■□□□ 1.35
C9orf3-208ENST00000451893 KCNH3Q9ULD8 1083 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms