RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 HDAC6Q9UBN7 1215 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 TRIM10Q9UDY6 481 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 RWDD2AQ9UIY3 292 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 CAPN7Q9Y6W3 813 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 KIF1AQ12756 1690 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 ALS2Q96Q42 1657 aa4.56□□□□□ -1.68
HMGB3P22-202ENST00000451823 XDHP47989 1333 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 PDS5AQ29RF7 1337 aaKnown RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 MYH13Q9UKX3 1938 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 TTC26A0AVF1 554 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 LGALS16A8MUM7 142 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 BTBD18B2RXH4 712 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 ARNTLO00327 626 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 SRGAP2O75044 1071 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 FAM107AO95990 144 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 THBDP07204 575 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 PAEPP09466 180 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 IFIT1P09914 478 aaKnown RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 SRGNP10124 158 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 GHRP10912 638 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 TCF3P15923 654 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 LSP1P33241 339 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 KRT9P35527 623 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 IARSP41252 1262 aaKnown RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 EPHB4P54760 987 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 SLC8A3P57103 927 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 INHBEP58166 350 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 KRT83P78385 493 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 AKAP17AQ02040 695 aaKnown RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 XRCC4Q13426 336 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 BYSLQ13895 437 aaKnown RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 TTF1Q15361 905 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 PTGISQ16647 500 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 CCDC40Q4G0X9 1142 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 HSP90AA4PQ58FG1 418 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 TCP11X2Q5H9J9 407 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 FIGNQ5HY92 759 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 SPECC1Q5M775 1068 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 HAUS3Q68CZ6 603 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 PPP4R3AQ6IN85 833 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 MICALCLQ6ZW33 695 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 COPS6Q7L5N1 327 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 FAM124AQ86V42 546 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 TBC1D10CQ8IV04 446 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 ANKRD18AQ8IVF6 992 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 DIS3L2Q8IYB7 885 aaKnown RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 GSPT2Q8IYD1 628 aaKnown RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 TEX11Q8IYF3 940 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 CCDC170Q8IYT3 715 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 TTLL6Q8N841 843 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 MB21D1Q8N884 522 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 NGDNQ8NEJ9 315 aaKnown RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 MYCBPAPQ8TBZ2 947 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZNF473Q8WTR7 871 aaKnown RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 WASF1Q92558 559 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 JAKMIP2Q96AA8 810 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 GPRASP2Q96D09 838 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 RRP36Q96EU6 259 aaKnown RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 SHDQ96IW2 340 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 RNPC3Q96LT9 517 aaKnown RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 JPH2Q9BR39 696 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 KRTAP17-1Q9BYP8 105 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 PUS7LQ9H0K6 701 aaKnown RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 CSRNP2Q9H175 543 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 ATP6V0A4Q9HBG4 840 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 VEZTQ9HBM0 779 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 CD248Q9HCU0 757 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 SLC40A1Q9NP59 571 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 ST6GALNAC2Q9UJ37 374 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 DENND2AQ9ULE3 1009 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 SNX12Q9UMY4 172 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 PCDHB6Q9Y5E3 794 aa4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 TIMM13Q9Y5L4 95 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P22-202ENST00000451823 RREB1Q92766 1687 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 DOCK2Q92608 1830 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZNF233A6NK53 670 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 KCNJ18B7U540 433 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 H0YGN5 161 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 UBE2Q2LH0YL09 131 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 H7C1D1 291 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 NDUFAB1O14561 156 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZNF213O14771 459 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZNF263O14978 683 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZNF185O15231 689 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 MATN3O15232 486 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 MAFGO15525 162 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 PJA2O43164 708 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 GPAA1O43292 621 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZBTB43O43298 467 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 KRT86O43790 486 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 MGRN1O60291 552 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 DNAJC8O75937 253 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 BMP15O95972 392 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZNF20P17024 532 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 TNFRSF1AP19438 455 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 SCP2P22307 547 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 EEF1GP26641 437 aaKnown RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 GUCY1A2P33402 732 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 ADD2P35612 726 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms