RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 CNPP09543 421 aaKnown RBP15.54■□□□□ 0.08
COL3A1-203ENST00000450867 BMP6P22004 513 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 PPP1R2P41236 205 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 PRCPP42785 496 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 BRCC3P46736 316 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 GUCY2FP51841 1108 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 CLDN10P78369 228 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 ENPEPQ07075 957 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 MORC3Q14149 939 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 FOXR2Q6PJQ5 311 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 RBM23Q86U06 439 aaKnown RBP15.54■□□□□ 0.08
COL3A1-203ENST00000450867 PPFIBP1Q86W92 1011 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 WDR49Q8IV35 697 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 ZC3H3Q8IXZ2 948 aaKnown RBP15.54■□□□□ 0.08
COL3A1-203ENST00000450867 SMYD4Q8IYR2 804 aaPredicted RBP15.54■□□□□ 0.08
COL3A1-203ENST00000450867 ADSSL1Q8N142 457 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 TRIML1Q8N9V2 468 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 LNX1Q8TBB1 728 aaPredicted RBP15.54■□□□□ 0.08
COL3A1-203ENST00000450867 SLC22A17Q8WUG5 538 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 CACTINQ8WUQ7 758 aaKnown RBP15.54■□□□□ 0.08
COL3A1-203ENST00000450867 MSLNLQ96KJ4 702 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 EMILIN2Q9BXX0 1053 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 CLSTN2Q9H4D0 955 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 INTS13Q9NVM9 706 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 DPP3Q9NY33 737 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 KIAA1468Q9P260 1216 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 C2orf16Q68DN1 1984 aa15.54■□□□□ 0.08
COL3A1-203ENST00000450867 DENND4AQ7Z401 1863 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 PTPRJQ12913 1337 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 PPEF2O14830 753 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 PER2O15055 1255 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 LINC01565O15544 149 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 EXOC3O60645 756 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 PAPLNO95428 1278 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 LILRA4P59901 499 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 MRPL58Q14197 206 aaKnown RBP15.53■□□□□ 0.08
COL3A1-203ENST00000450867 SKIV2LQ15477 1246 aaKnown RBP15.53■□□□□ 0.08
COL3A1-203ENST00000450867 LEXMQ3ZCV2 418 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 KIAA1841Q6NSI8 718 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.53■□□□□ 0.08
COL3A1-203ENST00000450867 TMEM130Q8N3G9 435 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 C1orf127Q8N9H9 656 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 RIN2Q8WYP3 895 aaPredicted RBP15.53■□□□□ 0.08
COL3A1-203ENST00000450867 B3GALT6Q96L58 329 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 CGRRF1Q99675 332 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 CLDND1Q9NY35 253 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 CLEC1BQ9P126 229 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 MTRRQ9UBK8 725 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 ITGA11Q9UKX5 1188 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 MAPK8IP1Q9UQF2 711 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 NUB1Q9Y5A7 615 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 BACE2Q9Y5Z0 518 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 HCFC2Q9Y5Z7 792 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 CUL9Q8IWT3 2517 aa15.53■□□□□ 0.08
COL3A1-203ENST00000450867 GOLGA6L22H0YM25 854 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 TEX28O15482 410 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 TBC1D4O60343 1298 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 ADH1AP07327 375 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 NR2F2P24468 414 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 RPL13P26373 211 aaKnown RBP15.52■□□□□ 0.08
COL3A1-203ENST00000450867 TKTP29401 623 aaKnown RBP15.52■□□□□ 0.08
COL3A1-203ENST00000450867 NDUFV1P49821 464 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 CLCN4P51793 760 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 DLX2Q07687 328 aaPredicted RBP15.52■□□□□ 0.08
COL3A1-203ENST00000450867 PSMD5Q16401 504 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 AAK1Q2M2I8 961 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 ANKS3Q6ZW76 656 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 LRRC52Q8N7C0 313 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 PLEKHO2Q8TD55 490 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 PARD3BQ8TEW8 1205 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 CLSTN3Q9BQT9 956 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 IGFLR1Q9H665 355 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 PCDHB8Q9UN66 801 aa15.52■□□□□ 0.08
COL3A1-203ENST00000450867 TCF20Q9UGU0 1960 aaKnown RBP15.51■□□□□ 0.07
COL3A1-203ENST00000450867 PPP1R3GB7ZBB8 358 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 I3L4J1 428 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 C2CD2LO14523 706 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 SPTLC1O15269 473 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 SRGAP2BP0DMP2 458 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 TYMPP19971 482 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 MCM4P33991 863 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 PNPLA4P41247 253 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 CASP4P49662 377 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 TAF6P49848 677 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 MRPS5P82675 430 aaKnown RBP15.51■□□□□ 0.07
COL3A1-203ENST00000450867 TFAMQ00059 246 aaKnown RBP15.51■□□□□ 0.07
COL3A1-203ENST00000450867 LRRC63Q05C16 580 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 DUOXA2Q1HG44 320 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 LILRA6Q6PI73 481 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 PRSS55Q6UWB4 352 aaPredicted RBP15.51■□□□□ 0.07
COL3A1-203ENST00000450867 RDH13Q8NBN7 331 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 APPL2Q8NEU8 664 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 OR5B17Q8NGF7 314 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 TMC2Q8TDI7 906 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 NOC3LQ8WTT2 800 aaKnown RBP15.51■□□□□ 0.07
COL3A1-203ENST00000450867 HDAC7Q8WUI4 952 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 CASP10Q92851 521 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 BORCS6Q96GS4 357 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 DHTKD1Q96HY7 919 aaPredicted RBP15.51■□□□□ 0.07
COL3A1-203ENST00000450867 ANKRD36BP1Q96IX9 119 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms