RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 DLL3Q9NYJ7 618 aa19.13■□□□□ 0.65
FAM3A-216ENST00000449971 SF3B1O75533 1304 aaKnown RBP eCLIP19.13■□□□□ 0.653e-6■■■■■ 137.9
FAM3A-216ENST00000449971 COL4A3Q01955 1670 aa19.12■□□□□ 0.65
FAM3A-216ENST00000449971 F13A1P00488 732 aa19.12■□□□□ 0.65
FAM3A-216ENST00000449971 CD72P21854 359 aa19.12■□□□□ 0.65
FAM3A-216ENST00000449971 SCP2P22307 547 aa19.12■□□□□ 0.65
FAM3A-216ENST00000449971 STAT6P42226 847 aa19.12■□□□□ 0.65
FAM3A-216ENST00000449971 MCL1Q07820 350 aa19.12■□□□□ 0.65
FAM3A-216ENST00000449971 XKR4Q5GH76 650 aa19.12■□□□□ 0.65
FAM3A-216ENST00000449971 VARS2Q5ST30 1063 aaKnown RBP19.12■□□□□ 0.65
FAM3A-216ENST00000449971 FAM171A1Q5VUB5 890 aa19.12■□□□□ 0.65
FAM3A-216ENST00000449971 MAML2Q8IZL2 1156 aaPredicted RBP19.12■□□□□ 0.65
FAM3A-216ENST00000449971 PDILTQ8N807 584 aa19.12■□□□□ 0.65
FAM3A-216ENST00000449971 SUMF1Q8NBK3 374 aa19.12■□□□□ 0.65
FAM3A-216ENST00000449971 DDX12PQ92771 950 aa19.12■□□□□ 0.65
FAM3A-216ENST00000449971 RHOBTB2Q9BYZ6 727 aa19.12■□□□□ 0.65
FAM3A-216ENST00000449971 GOLGA2P5Q9HBQ8 144 aa19.12■□□□□ 0.65
FAM3A-216ENST00000449971 MTF2Q9Y483 593 aaPredicted RBP19.12■□□□□ 0.65
FAM3A-216ENST00000449971 MYMKA6NI61 221 aa19.11■□□□□ 0.65
FAM3A-216ENST00000449971 HNRNPDLO14979 420 aaKnown RBP19.11■□□□□ 0.65
FAM3A-216ENST00000449971 CCL16O15467 120 aa19.11■□□□□ 0.65
FAM3A-216ENST00000449971 PPP6R2O75170 966 aa19.11■□□□□ 0.65
FAM3A-216ENST00000449971 B3GAT3O94766 335 aa19.11■□□□□ 0.65
FAM3A-216ENST00000449971 YEATS4O95619 227 aa19.11■□□□□ 0.65
FAM3A-216ENST00000449971 CLCNKBP51801 687 aa19.11■□□□□ 0.65
FAM3A-216ENST00000449971 ELAVL2Q12926 359 aaKnown RBP19.11■□□□□ 0.65
FAM3A-216ENST00000449971 HDAC7Q8WUI4 952 aa19.11■□□□□ 0.65
FAM3A-216ENST00000449971 UROC1Q96N76 676 aa19.11■□□□□ 0.65
FAM3A-216ENST00000449971 ZMAT2Q96NC0 199 aaKnown RBP19.11■□□□□ 0.65
FAM3A-216ENST00000449971 TTPALQ9BTX7 342 aa19.11■□□□□ 0.65
FAM3A-216ENST00000449971 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.11■□□□□ 0.65
FAM3A-216ENST00000449971 SLC38A7Q9NVC3 462 aa19.11■□□□□ 0.65
FAM3A-216ENST00000449971 EPG5Q9HCE0 2579 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 A0A087X0B3 334 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 KANSL1LA0AUZ9 987 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 FAM170BA6NMN3 283 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 ZMYND10O75800 440 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 KCNE1P15382 129 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 IGFBP6P24592 240 aaPredicted RBP19.1■□□□□ 0.65
FAM3A-216ENST00000449971 STARD6P59095 220 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 GTF2BQ00403 316 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 SOX4Q06945 474 aaPredicted RBP19.1■□□□□ 0.65
FAM3A-216ENST00000449971 PKP1Q13835 747 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 MLF2Q15773 248 aaPredicted RBP19.1■□□□□ 0.65
FAM3A-216ENST00000449971 SLC10A6Q3KNW5 377 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 ZC2HC1CQ53FD0 456 aaPredicted RBP19.1■□□□□ 0.65
FAM3A-216ENST00000449971 RTP2Q5QGT7 225 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 LIN9Q5TKA1 542 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 SFR1Q86XK3 245 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 GPR65Q8IYL9 337 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 ATRIPQ8WXE1 791 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 KCNN1Q92952 543 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 DDX27Q96GQ7 796 aaKnown RBP19.1■□□□□ 0.65
FAM3A-216ENST00000449971 FIZ1Q96SL8 496 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 KXD1Q9BQD3 176 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 HAPLN2Q9GZV7 340 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 CNTN3Q9P232 1028 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 CDH7Q9ULB5 785 aa19.1■□□□□ 0.65
FAM3A-216ENST00000449971 FANCMQ8IYD8 2048 aa19.09■□□□□ 0.65
FAM3A-216ENST00000449971 CUTAO60888 179 aa19.09■□□□□ 0.65
FAM3A-216ENST00000449971 CLTAP09496 248 aa19.09■□□□□ 0.65
FAM3A-216ENST00000449971 ABCD1P33897 745 aa19.09■□□□□ 0.65
FAM3A-216ENST00000449971 CREMQ03060 361 aa19.09■□□□□ 0.65
FAM3A-216ENST00000449971 UPP1Q16831 310 aa19.09■□□□□ 0.65
FAM3A-216ENST00000449971 SLC44A4Q53GD3 710 aa19.09■□□□□ 0.65
FAM3A-216ENST00000449971 PPM1LQ5SGD2 360 aa19.09■□□□□ 0.65
FAM3A-216ENST00000449971 LILRA6Q6PI73 481 aa19.09■□□□□ 0.65
FAM3A-216ENST00000449971 TSSK4Q6SA08 328 aa19.09■□□□□ 0.65
FAM3A-216ENST00000449971 C18orf25Q96B23 403 aaPredicted RBP19.09■□□□□ 0.65
FAM3A-216ENST00000449971 FNIP2Q9P278 1114 aa19.09■□□□□ 0.65
FAM3A-216ENST00000449971 USP18Q9UMW8 372 aa19.09■□□□□ 0.65
FAM3A-216ENST00000449971 TDRD15B5MCY1 1934 aaKnown RBP19.09■□□□□ 0.65
FAM3A-216ENST00000449971 MIA3Q5JRA6 1907 aa19.09■□□□□ 0.65
FAM3A-216ENST00000449971 MYH15Q9Y2K3 1946 aa19.08■□□□□ 0.65
FAM3A-216ENST00000449971 MTCL1Q9Y4B5 1905 aaKnown RBP19.08■□□□□ 0.65
FAM3A-216ENST00000449971 TMEM189-UBE2V1I3L0A0 370 aa19.08■□□□□ 0.64
FAM3A-216ENST00000449971 MEFVO15553 781 aaPredicted RBP19.08■□□□□ 0.64
FAM3A-216ENST00000449971 TRAPPC3O43617 180 aa19.08■□□□□ 0.64
FAM3A-216ENST00000449971 PIGRP01833 764 aa19.08■□□□□ 0.64
FAM3A-216ENST00000449971 CXCL8P10145 99 aa19.08■□□□□ 0.64
FAM3A-216ENST00000449971 IDEP14735 1019 aa19.08■□□□□ 0.64
FAM3A-216ENST00000449971 GAP43P17677 238 aa19.08■□□□□ 0.64
FAM3A-216ENST00000449971 KYAT1Q16773 422 aa19.08■□□□□ 0.64
FAM3A-216ENST00000449971 ZNF720Q7Z2F6 126 aa19.08■□□□□ 0.64
FAM3A-216ENST00000449971 ITFG1Q8TB96 612 aa19.08■□□□□ 0.64
FAM3A-216ENST00000449971 FGF13Q92913 245 aa19.08■□□□□ 0.64
FAM3A-216ENST00000449971 DNAJC19Q96DA6 116 aa19.08■□□□□ 0.64
FAM3A-216ENST00000449971 MSTO1Q9BUK6 570 aa19.08■□□□□ 0.64
FAM3A-216ENST00000449971 MRPL44Q9H9J2 332 aaKnown RBP19.08■□□□□ 0.64
FAM3A-216ENST00000449971 PLEKHA5Q9HAU0 1116 aa19.08■□□□□ 0.64
FAM3A-216ENST00000449971 TBC1D7Q9P0N9 293 aa19.08■□□□□ 0.64
FAM3A-216ENST00000449971 CDV3Q9UKY7 258 aaKnown RBP19.08■□□□□ 0.64
FAM3A-216ENST00000449971 ANKRD63C9JTQ0 380 aa19.07■□□□□ 0.64
FAM3A-216ENST00000449971 I3L4J1 428 aa19.07■□□□□ 0.64
FAM3A-216ENST00000449971 PODXLO00592 558 aa19.07■□□□□ 0.64
FAM3A-216ENST00000449971 SPTLC1O15269 473 aa19.07■□□□□ 0.64
FAM3A-216ENST00000449971 C8AP07357 584 aa19.07■□□□□ 0.64
FAM3A-216ENST00000449971 TNFSF9P41273 254 aa19.07■□□□□ 0.64
FAM3A-216ENST00000449971 ATXN1P54253 815 aaKnown RBP19.07■□□□□ 0.64
FAM3A-216ENST00000449971 SPAG1Q07617 926 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms