RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 FBXW10Q5XX13 1052 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 ZNF571Q7Z3V5 609 aaPredicted RBP10.97□□□□□ -0.65
CTC1-202ENST00000449476 TEX2Q8IWB9 1127 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 LRRC71Q8N4P6 559 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 LRRN4CLQ8ND94 238 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 PNMA5Q96PV4 448 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 NIF3L1Q9GZT8 377 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 UBN1Q9NPG3 1134 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 DCCP43146 1447 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 FAM47DPA6NHR8 397 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 RBP3P10745 1247 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 PSMC6P62333 389 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 POU5F1BQ06416 359 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 MTM1Q13496 603 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 TMEM132DQ14C87 1099 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 STILQ15468 1287 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 ITPRIPL1Q6GPH6 555 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 ACAD10Q6JQN1 1059 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 ZNF720Q7Z2F6 126 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 FEZF2Q8TBJ5 459 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 PIP4K2CQ8TBX8 421 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 CYFIP2Q96F07 1278 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 SPATS2LQ9NUQ6 558 aaKnown RBP10.97□□□□□ -0.65
CTC1-202ENST00000449476 GTSE1Q9NYZ3 720 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 PRDM4Q9UKN5 801 aa10.97□□□□□ -0.65
CTC1-202ENST00000449476 GNGT2O14610 69 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 CYTH3O43739 400 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 SGPL1O95470 568 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 POLE2P56282 527 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 IL1RL1Q01638 556 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 GPRASP2Q96D09 838 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 MTMR8Q96EF0 704 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 ANKZF1Q9H8Y5 726 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 GRAP2O75791 330 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 MUTP22033 750 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 ESRRGP62508 458 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 PTGISQ16647 500 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 SAMD7Q7Z3H4 446 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 ARL8AQ96BM9 186 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 ARHGEF26Q96DR7 871 aa10.96□□□□□ -0.65
CTC1-202ENST00000449476 PABPC3Q9H361 631 aaKnown RBP10.96□□□□□ -0.65
CTC1-202ENST00000449476 PSMC3IPQ9P2W1 217 aaPredicted RBP10.96□□□□□ -0.65
CTC1-202ENST00000449476 FAF1Q9UNN5 650 aaPredicted RBP10.96□□□□□ -0.65
CTC1-202ENST00000449476 FAM237AA0A1B0GTK4 181 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 SMIM22K7EJ46 135 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 MOCS2O96007 188 aaPredicted RBP10.96□□□□□ -0.66
CTC1-202ENST00000449476 PDE1CQ14123 709 aaPredicted RBP10.96□□□□□ -0.66
CTC1-202ENST00000449476 ATF7IP2Q5U623 682 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 SH3RF1Q7Z6J0 888 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 ZNF526Q8TF50 670 aaPredicted RBP10.96□□□□□ -0.66
CTC1-202ENST00000449476 NUDT12Q9BQG2 462 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 OSGEPQ9NPF4 335 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 GGA3Q9NZ52 723 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 THEGQ9P2T0 379 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 ZC3H7BQ9UGR2 993 aaKnown RBP10.96□□□□□ -0.66
CTC1-202ENST00000449476 PIN4Q9Y237 131 aaKnown RBP10.96□□□□□ -0.66
CTC1-202ENST00000449476 ATP9BO43861 1147 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 CCDC22O60826 627 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 SHMT1P34896 483 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 FNTAP49354 379 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 KIF19Q2TAC6 998 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 SMTNL2Q2TAL5 461 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 Q4G0T1 1027 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 IER5Q5VY09 327 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 SPATA18Q8TC71 538 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 HAUS8Q9BT25 410 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 WWP1Q9H0M0 922 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 XPO7Q9UIA9 1087 aaKnown RBP10.96□□□□□ -0.66
CTC1-202ENST00000449476 TMX2Q9Y320 296 aa10.96□□□□□ -0.66
CTC1-202ENST00000449476 WTIPA6NIX2 430 aaPredicted RBP10.95□□□□□ -0.66
CTC1-202ENST00000449476 CLGNO14967 610 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 PPP1R12AO14974 1030 aaPredicted RBP10.95□□□□□ -0.66
CTC1-202ENST00000449476 BNIP3LO60238 219 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 KRT10P13645 584 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 GMPSP49915 693 aaPredicted RBP10.95□□□□□ -0.66
CTC1-202ENST00000449476 CENPCQ03188 943 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 AGBL3Q8NEM8 1001 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 MDM1Q8TC05 714 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 PGBD4Q96DM1 585 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 ATXN7L3BQ96GX2 97 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 CHMP2BQ9UQN3 213 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 F8VZ95 297 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 MAGEB2O15479 319 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 C3orf62Q6ZUJ4 267 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 CDR2LQ86X02 465 aaPredicted RBP10.95□□□□□ -0.66
CTC1-202ENST00000449476 ALKBH8Q96BT7 664 aaKnown RBP10.95□□□□□ -0.66
CTC1-202ENST00000449476 CYP4F11Q9HBI6 524 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 OLFML3Q9NRN5 406 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 LRRC10BA6NIK2 292 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 H3BQF6 201 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 HSPA8P11142 646 aaKnown RBP10.95□□□□□ -0.66
CTC1-202ENST00000449476 BRD2P25440 801 aaKnown RBP10.95□□□□□ -0.66
CTC1-202ENST00000449476 ELF1P32519 619 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 NPTX2P47972 431 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 RAD23BP54727 409 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 C2CD6Q53TS8 623 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 TMTC4Q5T4D3 741 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 DNAAF5Q86Y56 855 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 OR6P1Q8NGX9 317 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 AGAP3Q96P47 875 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms