RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 XKR4Q5GH76 650 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 PARM1Q6UWI2 310 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 ALKAL1Q6UXT8 129 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 GPBP1Q86WP2 473 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 SLC7A14Q8TBB6 771 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 BORCS6Q96GS4 357 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 PAGE5Q96GU1 130 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 ACO2Q99798 780 aaKnown RBP15□□□□□ -0.01
PDLIM2-213ENST00000448520 KIFC3Q9BVG8 833 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 CXCL16Q9H2A7 254 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 BLZF1Q9H2G9 400 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 SLC38A7Q9NVC3 462 aa15□□□□□ -0.01
PDLIM2-213ENST00000448520 MYMKA6NI61 221 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 CCDC169A6NNP5 214 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 EDN1P05305 212 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 SLFN14P0C7P3 912 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 PEX3P56589 373 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 NTHL1P78549 312 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 PFKPQ01813 784 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 PRKCQQ04759 706 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 DMP1Q13316 513 aaPredicted RBP14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 CAMK4Q16566 473 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 RSPO2Q6UXX9 243 aaPredicted RBP14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 C1orf210Q8IVY1 113 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 CEP57L1Q8IYX8 460 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 KCTD17Q8N5Z5 321 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 SYT2Q8N9I0 419 aaPredicted RBP14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 ZNF461Q8TAF7 563 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 FGF14Q92915 247 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 RPP25Q9BUL9 199 aaKnown RBP14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 MRPL4Q9BYD3 311 aaKnown RBP14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 PTPRHQ9HD43 1115 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 CDY1Q9Y6F8 540 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 GVINP1Q7Z2Y8 2422 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 NOTCH4Q99466 2003 aa14.99□□□□□ -0.01
PDLIM2-213ENST00000448520 DMDP11532 3685 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 KINO60870 393 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 MBD3O95983 291 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 LMNAP02545 664 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 DCNP07585 359 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 ELF1P32519 619 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 RPL9P32969 192 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 NPTX2P47972 431 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 PABPC1LQ4VXU2 614 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 SLC44A4Q53GD3 710 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 ARSHQ5FYA8 562 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 GLRA4Q5JXX5 417 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 RINT1Q6NUQ1 792 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 ZC3H14Q6PJT7 736 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 CD300LGQ6UXG3 332 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 SV2BQ7L1I2 683 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 DYMQ7RTS9 669 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 PJA1Q8NG27 643 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 ITFG1Q8TB96 612 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 DRC1Q96MC2 740 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 ACAP3Q96P50 834 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 NTPCRQ9BSD7 190 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 TCHPQ9BT92 498 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 TIPINQ9BVW5 301 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 OSBPL6Q9BZF3 934 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 KMT5AQ9NQR1 393 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 AVENQ9NQS1 362 aaPredicted RBP14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 KBTBD4Q9NVX7 518 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 GDE1Q9NZC3 331 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 DLGAP2Q9P1A6 1054 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 ARHGAP28Q9P2N2 729 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 DNMT3BQ9UBC3 853 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 CITO14578 2027 aa14.98□□□□□ -0.01
PDLIM2-213ENST00000448520 KANSL1LA0AUZ9 987 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 H7C4K7 107 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 SYN3O14994 580 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 MCF2P10911 925 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 KCNE1P15382 129 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 PTPN2P17706 415 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 TKTP29401 623 aaKnown RBP14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 PNOCQ13519 176 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 CUL4BQ13620 913 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 ZNF568Q3ZCX4 644 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 SLC8B1Q6J4K2 584 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 C1orf186Q6ZWK4 172 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 NELL2Q99435 816 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 PYM1Q9BRP8 204 aaKnown RBP14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 CDT1Q9H211 546 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 CUEDC2Q9H467 287 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 CLSTN2Q9H4D0 955 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 TMEM63CQ9P1W3 806 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 USP25Q9UHP3 1055 aa14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 MRPS23Q9Y3D9 190 aaKnown RBP14.97□□□□□ -0.01
PDLIM2-213ENST00000448520 F5P12259 2224 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 ARHGEF37A1IGU5 675 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 TRAK2O60296 914 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 HIP1RO75146 1068 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 ABLIM3O94929 683 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 IGFBP6P24592 240 aaPredicted RBP14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 MAGEA9P43362 315 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 BRCC3P46736 316 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 SMTNP53814 917 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 MLF2Q15773 248 aaPredicted RBP14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 CAVIN1Q6NZI2 390 aaKnown RBP14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 ERMP1Q7Z2K6 904 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms