RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 UBN1Q9NPG3 1134 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 SUFUQ9UMX1 484 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 FAM47DPA6NHR8 397 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 WDR64B1ANS9 1081 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 MMP10P09238 476 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 GARTP22102 1010 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 VPS41P49754 854 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 CLNS1AP54105 237 aaKnown RBP20.27■□□□□ 0.84
SDCBP-204ENST00000447182 SLC18A1P54219 525 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 PLA2G4FQ68DD2 849 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 TDRPQ86YL5 185 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 EXD1Q8NHP7 514 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 PI4K2AQ9BTU6 479 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 HEMGNQ9BXL5 484 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 CNTNAP1P78357 1384 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 RASA4BC9J798 803 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 RASA4O43374 803 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 UNC5CO95185 931 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 CALCAP01258 141 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 FOXN2P32314 431 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 MAGEA4P43358 317 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 LMNB2Q03252 620 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 ECHDC2Q86YB7 292 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 KIF2BQ8N4N8 673 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 SAMD3Q8N6K7 520 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 ANKLE1Q8NAG6 615 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.26■□□□□ 0.83
SDCBP-204ENST00000447182 SYTL5Q8TDW5 730 aaPredicted RBP20.26■□□□□ 0.83
SDCBP-204ENST00000447182 ELMO3Q96BJ8 720 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 VCPIP1Q96JH7 1222 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 C9orf72Q96LT7 481 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.26■□□□□ 0.83
SDCBP-204ENST00000447182 STARD13Q9Y3M8 1113 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 RPSAP08865 295 aaKnown RBP20.26■□□□□ 0.83
SDCBP-204ENST00000447182 CLDN10P78369 228 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 KRT76Q01546 638 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 LIN9Q5TKA1 542 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 RGS9BPQ6ZS82 235 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 BSNDQ8WZ55 320 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 CFAP57Q96MR6 1250 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 RBM15Q96T37 977 aaKnown RBP eCLIP20.26■□□□□ 0.83
SDCBP-204ENST00000447182 PITPNM3Q9BZ71 974 aa20.26■□□□□ 0.83
SDCBP-204ENST00000447182 ZNF70Q9UC06 446 aaPredicted RBP20.26■□□□□ 0.83
SDCBP-204ENST00000447182 ASMTLO95671 621 aa20.25■□□□□ 0.83
SDCBP-204ENST00000447182 CCNE2O96020 404 aa20.25■□□□□ 0.83
SDCBP-204ENST00000447182 WDR4P57081 412 aaKnown RBP20.25■□□□□ 0.83
SDCBP-204ENST00000447182 TAS2R40P59535 323 aa20.25■□□□□ 0.83
SDCBP-204ENST00000447182 BRDTQ58F21 947 aaPredicted RBP20.25■□□□□ 0.83
SDCBP-204ENST00000447182 TRIM72Q6ZMU5 477 aa20.25■□□□□ 0.83
SDCBP-204ENST00000447182 ANO5Q75V66 913 aa20.25■□□□□ 0.83
SDCBP-204ENST00000447182 TRABD2AQ86V40 505 aa20.25■□□□□ 0.83
SDCBP-204ENST00000447182 RDM1Q8NG50 284 aa20.25■□□□□ 0.83
SDCBP-204ENST00000447182 FBF1Q8TES7 1133 aa20.25■□□□□ 0.83
SDCBP-204ENST00000447182 GLIS2Q9BZE0 524 aaPredicted RBP20.25■□□□□ 0.83
SDCBP-204ENST00000447182 MRPL47Q9HD33 250 aaKnown RBP20.25■□□□□ 0.83
SDCBP-204ENST00000447182 BATF3Q9NR55 127 aa20.25■□□□□ 0.83
SDCBP-204ENST00000447182 EP400Q96L91 3159 aa20.25■□□□□ 0.83
SDCBP-204ENST00000447182 NFASCO94856 1347 aa20.25■□□□□ 0.83
SDCBP-204ENST00000447182 CLRN2A0PK11 232 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 YDJCA8MPS7 323 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 PRPF4O43172 522 aaKnown RBP eCLIP20.24■□□□□ 0.83
SDCBP-204ENST00000447182 WFS1O76024 890 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 SEPT14Q6ZU15 432 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 ANKS1BQ7Z6G8 1248 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 DENND1AQ8TEH3 1009 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 TTC25Q96NG3 672 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 TXLNGQ9NUQ3 528 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 GSTTP1A0A1W2PQM5 241 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 ATP9AO75110 1047 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 ATP5HO75947 161 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 YARSP54577 528 aaKnown RBP20.24■□□□□ 0.83
SDCBP-204ENST00000447182 LACTBP83111 547 aaPredicted RBP20.24■□□□□ 0.83
SDCBP-204ENST00000447182 MAMLD1Q13495 774 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 PGM5Q15124 567 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 PLEKHA7Q6IQ23 1121 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 LLGL2Q6P1M3 1020 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 DRICH1Q6PGQ1 229 aaPredicted RBP20.24■□□□□ 0.83
SDCBP-204ENST00000447182 ZNF516Q92618 1163 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 PRCCQ92733 491 aaPredicted RBP20.24■□□□□ 0.83
SDCBP-204ENST00000447182 CEP83Q9Y592 693 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 PSME4Q14997 1843 aa20.24■□□□□ 0.83
SDCBP-204ENST00000447182 GCAP28676 217 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 CCNG1P51959 295 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 TMED2Q15363 201 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 CCDC142Q17RM4 750 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 P3H1Q32P28 736 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 DAB2IPQ5VWQ8 1189 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 PHLDB2Q86SQ0 1253 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 RAB3IPQ96QF0 476 aaPredicted RBP20.23■□□□□ 0.83
SDCBP-204ENST00000447182 TCEAL9Q9UHQ7 104 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 A8MUI8 341 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 H0YIN7 160 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 HNRNPDLO14979 420 aaKnown RBP20.23■□□□□ 0.83
SDCBP-204ENST00000447182 POLGP54098 1239 aaPredicted RBP20.23■□□□□ 0.83
SDCBP-204ENST00000447182 RTP1P59025 263 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 NOMO3P69849 1222 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 ATP11AP98196 1134 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 PARP6Q2NL67 630 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 WDR44Q5JSH3 913 aa20.23■□□□□ 0.83
SDCBP-204ENST00000447182 PPP1R2P3Q6NXS1 205 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms