RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 ZNF677Q86XU0 584 aa23.64■■□□□ 1.37
CTDSPL-206ENST00000443503 FEZF2Q8TBJ5 459 aa23.64■■□□□ 1.37
CTDSPL-206ENST00000443503 FBXO41Q8TF61 875 aa23.64■■□□□ 1.37
CTDSPL-206ENST00000443503 CYTH2Q99418 400 aa23.64■■□□□ 1.37
CTDSPL-206ENST00000443503 IDI2Q9BXS1 227 aa23.64■■□□□ 1.37
CTDSPL-206ENST00000443503 PHF20L1A8MW92 1017 aa23.64■■□□□ 1.37
CTDSPL-206ENST00000443503 ACAD10Q6JQN1 1059 aa23.64■■□□□ 1.37
CTDSPL-206ENST00000443503 LRRC31Q6UY01 552 aa23.64■■□□□ 1.37
CTDSPL-206ENST00000443503 C1orf131Q8NDD1 294 aaKnown RBP23.64■■□□□ 1.37
CTDSPL-206ENST00000443503 CASKIN2Q8WXE0 1202 aa23.64■■□□□ 1.37
CTDSPL-206ENST00000443503 DHX38Q92620 1227 aaKnown RBP23.64■■□□□ 1.37
CTDSPL-206ENST00000443503 ZSWIM1Q9BR11 485 aa23.64■■□□□ 1.37
CTDSPL-206ENST00000443503 GGT7Q9UJ14 662 aa23.64■■□□□ 1.37
CTDSPL-206ENST00000443503 TFRCP02786 760 aaKnown RBP23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 RBP3P10745 1247 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 LSP1P33241 339 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 CUL2Q13617 745 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 TMEM119Q4V9L6 283 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 ANKRD13AQ8IZ07 590 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 MIPOL1Q8TD10 442 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 PRMT1Q99873 361 aaKnown RBP23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 HAUS5O94927 633 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 ZFXP17010 805 aaPredicted RBP23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 ARFIP2P53365 341 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 RASIP1Q5U651 963 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 KLC3Q6P597 504 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 NUDCD3Q8IVD9 361 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 NT5C1AQ9BXI3 368 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 APOBEC2Q9Y235 224 aaKnown RBP23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 CAMTA1Q9Y6Y1 1673 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 SLURP2P0DP57 97 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 ART3Q13508 389 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.63■■□□□ 1.376e-7■■■■■ 94.1
CTDSPL-206ENST00000443503 C4orf33Q8N1A6 199 aa23.63■■□□□ 1.37
CTDSPL-206ENST00000443503 CTSHP09668 335 aa23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 TYK2P29597 1187 aa23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 COILP38432 576 aaPredicted RBP23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 STILQ15468 1287 aa23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 TRIM67Q6ZTA4 783 aa23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 SENP1Q9P0U3 644 aa23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 LRRC10BA6NIK2 292 aa23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 C6orf222P0C671 652 aaPredicted RBP23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 CYP11B1P15538 503 aa23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 ITGA8P53708 1063 aa23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 CYP4A22Q5TCH4 519 aa23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 UBA3Q8TBC4 463 aa23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 ZNF473Q8WTR7 871 aaKnown RBP23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 EPS15L1Q9UBC2 864 aa23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 SLITRK3O94933 977 aa23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 MX2P20592 715 aa23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 PEX19P40855 299 aa23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 TAF1CQ15572 869 aaPredicted RBP23.62■■□□□ 1.37
CTDSPL-206ENST00000443503 LRRIQ3A6PVS8 624 aaPredicted RBP23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 EML1O00423 815 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 PAMP19021 973 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 RARRES1P49788 294 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 SOX10P56693 466 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 MAPK7Q13164 816 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 FAM83AQ86UY5 434 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 ACSF2Q96CM8 615 aaPredicted RBP23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 KIF9Q9HAQ2 790 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 FOXP2O15409 715 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 HSD17B3P37058 310 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 CASP2P42575 452 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 CCNYL1Q8N7R7 359 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 SLC20A1Q8WUM9 679 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 PRPF31Q8WWY3 499 aaKnown RBP23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 TRAF3IP3Q9Y228 551 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 GAKO14976 1311 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 OGTO15294 1046 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 MEFVO15553 781 aaPredicted RBP23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 NLRP11P59045 1033 aaKnown RBP23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 SV2AQ7L0J3 742 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 C4orf19Q8IY42 314 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 SPATA18Q8TC71 538 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 AGAP3Q96P47 875 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 TPX2Q9ULW0 747 aaKnown RBP23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 ZBTB39O15060 712 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 CHUKO15111 745 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 IL18RAPO95256 599 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 COPS2P61201 443 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 OCRLQ01968 901 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 PCNX4Q63HM2 1172 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 OTOP1Q7RTM1 612 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 MTMR9Q96QG7 549 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 UBN1Q9NPG3 1134 aa23.61■■□□□ 1.37
CTDSPL-206ENST00000443503 ATP9BO43861 1147 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 SUPT20HL2P0C7V6 817 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 GLIS3Q8NEA6 775 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 APPL2Q8NEU8 664 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 SLC35C1Q96A29 364 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 MAP3K20Q9NYL2 800 aaKnown RBP23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 SPECC1L-ADORA2AF8WAN1 911 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 CLCN3P51790 818 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 SRLQ86TD4 932 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 ATG4AQ8WYN0 398 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 ATXN7L3BQ96GX2 97 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 XPO6Q96QU8 1125 aaKnown RBP23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 TTC1Q99614 292 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 AGO4Q9HCK5 861 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms