RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 EPHA5P54756 1037 aa13.04□□□□□ -0.32
TNXB-202ENST00000442721 ZNF174Q15697 407 aa13.04□□□□□ -0.32
TNXB-202ENST00000442721 ZNF568Q3ZCX4 644 aa13.04□□□□□ -0.32
TNXB-202ENST00000442721 VITQ6UXI7 678 aa13.04□□□□□ -0.32
TNXB-202ENST00000442721 PDZD4Q76G19 769 aaPredicted RBP13.04□□□□□ -0.32
TNXB-202ENST00000442721 DAW1Q8N136 415 aa13.04□□□□□ -0.32
TNXB-202ENST00000442721 SUSD3Q96L08 255 aa13.04□□□□□ -0.32
TNXB-202ENST00000442721 ZSWIM3Q96MP5 696 aa13.04□□□□□ -0.32
TNXB-202ENST00000442721 CNTNAP3BQ96NU0 1288 aa13.04□□□□□ -0.32
TNXB-202ENST00000442721 CNTNAP3Q9BZ76 1288 aa13.04□□□□□ -0.32
TNXB-202ENST00000442721 TMEM134Q9H6X4 195 aa13.04□□□□□ -0.32
TNXB-202ENST00000442721 CYP4F11Q9HBI6 524 aa13.04□□□□□ -0.32
TNXB-202ENST00000442721 ZNF334Q9HCZ1 680 aaPredicted RBP13.04□□□□□ -0.32
TNXB-202ENST00000442721 ARHGAP28Q9P2N2 729 aa13.04□□□□□ -0.32
TNXB-202ENST00000442721 CDV3Q9UKY7 258 aaKnown RBP13.04□□□□□ -0.32
TNXB-202ENST00000442721 NCANO14594 1321 aa13.04□□□□□ -0.32
TNXB-202ENST00000442721 KMT2BQ9UMN6 2715 aaPredicted RBP13.04□□□□□ -0.32
TNXB-202ENST00000442721 ARNTLO00327 626 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 MCF2P10911 925 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 RPL9P32969 192 aaKnown RBP13.03□□□□□ -0.32
TNXB-202ENST00000442721 CCT6AP40227 531 aaKnown RBP13.03□□□□□ -0.32
TNXB-202ENST00000442721 NPTX2P47972 431 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 NRLP54845 237 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 ARPP19P56211 112 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 GUCY1B3Q02153 619 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 SAFBQ15424 915 aaKnown RBP eCLIP13.03□□□□□ -0.32
TNXB-202ENST00000442721 HS6ST3Q8IZP7 471 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 C4orf32Q8N8J7 132 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 DEPDC1BQ8WUY9 529 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 SMARCD2Q92925 531 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 IRF7Q92985 503 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 RTKNQ9BST9 563 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 MRPL4Q9BYD3 311 aaKnown RBP13.03□□□□□ -0.32
TNXB-202ENST00000442721 FOXP1Q9H334 677 aaPredicted RBP13.03□□□□□ -0.32
TNXB-202ENST00000442721 CEP72Q9P209 647 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 AFF4Q9UHB7 1163 aaKnown RBP13.03□□□□□ -0.32
TNXB-202ENST00000442721 GMEB2Q9UKD1 530 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 MAFFQ9ULX9 164 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 NDRG2Q9UN36 371 aaKnown RBP13.03□□□□□ -0.32
TNXB-202ENST00000442721 KIAA1024Q9UPX6 916 aa13.03□□□□□ -0.32
TNXB-202ENST00000442721 CHRNB1P11230 501 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 PSMC3P17980 439 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 GDI1P31150 447 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 PEX3P56589 373 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 OSTNP61366 133 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 MAPK7Q13164 816 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 CTXN3Q4LDR2 81 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 TTC38Q5R3I4 469 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 CYP4A22Q5TCH4 519 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 ZNF280DQ6N043 979 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 MFSD6LQ8IWD5 586 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 CELF5Q8N6W0 485 aaKnown RBP13.02□□□□□ -0.33
TNXB-202ENST00000442721 LEMD2Q8NC56 503 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 BEST2Q8NFU1 509 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 FAM3CQ92520 227 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 C18orf25Q96B23 403 aaPredicted RBP13.02□□□□□ -0.33
TNXB-202ENST00000442721 ACAP3Q96P50 834 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 TARS2Q9BW92 718 aaKnown RBP13.02□□□□□ -0.33
TNXB-202ENST00000442721 DDX19AQ9NUU7 478 aaKnown RBP13.02□□□□□ -0.33
TNXB-202ENST00000442721 USP18Q9UMW8 372 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 NUB1Q9Y5A7 615 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 PIAS3Q9Y6X2 628 aa13.02□□□□□ -0.33
TNXB-202ENST00000442721 CCDC169A6NNP5 214 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 HIP1RO75146 1068 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 VNN2O95498 520 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 VIPR2P41587 438 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 CCR3P51677 355 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 MLLT6P55198 1093 aaPredicted RBP13.01□□□□□ -0.33
TNXB-202ENST00000442721 TWF1Q12792 350 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 DMP1Q13316 513 aaPredicted RBP13.01□□□□□ -0.33
TNXB-202ENST00000442721 GAS6Q14393 721 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 PPP2R5DQ14738 602 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 LAIR1Q6GTX8 287 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 IQCEQ6IPM2 695 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 MPZL3Q6UWV2 235 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 RNF19BQ6ZMZ0 732 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 ELMOD1Q8N336 334 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 IGSF22Q8N9C0 903 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 APPL2Q8NEU8 664 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 ZSCAN18Q8TBC5 510 aaPredicted RBP13.01□□□□□ -0.33
TNXB-202ENST00000442721 DDX12PQ92771 950 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 C8orf76Q96K31 380 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 ZNF512Q96ME7 567 aaPredicted RBP13.01□□□□□ -0.33
TNXB-202ENST00000442721 TBC1D32Q96NH3 1257 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 LRRC3Q9BY71 257 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 LMAN1LQ9HAT1 526 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 ASAH2Q9NR71 780 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 LRWD1Q9UFC0 647 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 PCDHB8Q9UN66 801 aa13.01□□□□□ -0.33
TNXB-202ENST00000442721 RBM19Q9Y4C8 960 aaKnown RBP13.01□□□□□ -0.33
TNXB-202ENST00000442721 DCDC2BA2VCK2 349 aa13□□□□□ -0.33
TNXB-202ENST00000442721 ZNF263O14978 683 aa13□□□□□ -0.33
TNXB-202ENST00000442721 LRP3O75074 770 aa13□□□□□ -0.33
TNXB-202ENST00000442721 PAPSS2O95340 614 aaPredicted RBP13□□□□□ -0.33
TNXB-202ENST00000442721 RETP07949 1114 aa13□□□□□ -0.33
TNXB-202ENST00000442721 MYL4P12829 197 aa13□□□□□ -0.33
TNXB-202ENST00000442721 GJA1P17302 382 aa13□□□□□ -0.33
TNXB-202ENST00000442721 MCM4P33991 863 aa13□□□□□ -0.33
TNXB-202ENST00000442721 TRAPPC10P48553 1259 aa13□□□□□ -0.33
TNXB-202ENST00000442721 SATB1Q01826 763 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms