RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 EIF4BP23588 611 aaKnown RBP6.44□□□□□ -1.38
VPS50-205ENST00000441602 FLT3LGP49771 235 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 PRMT2P55345 433 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 MYL6P60660 151 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 FMO1Q01740 532 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 SEZ6Q53EL9 994 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 SEL1L2Q5TEA6 688 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 CYP4F22Q6NT55 531 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 MMGT1Q8N4V1 131 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 SLC35G2Q8TBE7 412 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 MAIP1Q8WWC4 291 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 KIF12Q96FN5 646 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 ZNF560Q96MR9 790 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 RPS6KC1Q96S38 1066 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 HDAC6Q9UBN7 1215 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 CNOT8Q9UFF9 292 aaKnown RBP6.44□□□□□ -1.38
VPS50-205ENST00000441602 KIAA1257Q9ULG3 409 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.44□□□□□ -1.38
VPS50-205ENST00000441602 TRPV2Q9Y5S1 764 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 CCDC151A5D8V7 595 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 CCDC188H7C350 402 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 GPR25O00155 361 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 PGRMC1O00264 195 aaKnown RBP6.44□□□□□ -1.38
VPS50-205ENST00000441602 MTA2O94776 668 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 CYP1A2P05177 515 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 MMEP08473 750 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 PAEPP09466 180 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 CD19P15391 556 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 BEX3Q00994 111 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 TAP1Q03518 808 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 AMHR2Q16671 573 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 SLC47A2Q86VL8 602 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 ZNF564Q8TBZ8 553 aaPredicted RBP6.44□□□□□ -1.38
VPS50-205ENST00000441602 KAT2BQ92831 832 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 CPB2Q96IY4 423 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 TLR10Q9BXR5 811 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 WNT8AQ9H1J5 351 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 UBQLN1Q9UMX0 589 aaKnown RBP6.44□□□□□ -1.38
VPS50-205ENST00000441602 NOD1Q9Y239 953 aa6.44□□□□□ -1.38
VPS50-205ENST00000441602 KIF3CO14782 793 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 TBC1D8O95759 1140 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 STAU1O95793 577 aaKnown RBP6.43□□□□□ -1.38
VPS50-205ENST00000441602 EDN1P05305 212 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 CHRNB2P17787 502 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 DNA2P51530 1060 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 PURAQ00577 322 aaKnown RBP6.43□□□□□ -1.38
VPS50-205ENST00000441602 PTPN11Q06124 597 aaPredicted RBP6.43□□□□□ -1.38
VPS50-205ENST00000441602 C1QBPQ07021 282 aaKnown RBP6.43□□□□□ -1.38
VPS50-205ENST00000441602 MARCH8Q5T0T0 291 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 ZNF572Q7Z3I7 529 aaPredicted RBP6.43□□□□□ -1.38
VPS50-205ENST00000441602 RNF180Q86T96 592 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 DNAJB3Q8WWF6 145 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 TSC1Q92574 1164 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 OSMRQ99650 979 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 THAP2Q9H0W7 228 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 ADAMTS10Q9H324 1103 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 MINDY3Q9H8M7 445 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 XPNPEP3Q9NQH7 507 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 DPP3Q9NY33 737 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 ADAM22Q9P0K1 906 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 NXF1Q9UBU9 619 aaKnown RBP6.43□□□□□ -1.38
VPS50-205ENST00000441602 STRIP2Q9ULQ0 834 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 AGAP1Q9UPQ3 857 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 CNTN6Q9UQ52 1028 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 PIN4Q9Y237 131 aaKnown RBP6.43□□□□□ -1.38
VPS50-205ENST00000441602 NUB1Q9Y5A7 615 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 TMEM110-MUSTN1A8MSY1 372 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 NCK2O43639 380 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 RRP9O43818 475 aaKnown RBP6.43□□□□□ -1.38
VPS50-205ENST00000441602 FAM189A1O60320 539 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 HMGCRP04035 888 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 PNPLA4P41247 253 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 SLC1A1P43005 524 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 MRPS6P82932 125 aaKnown RBP6.43□□□□□ -1.38
VPS50-205ENST00000441602 NAA35Q5VZE5 725 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 JADE1Q6IE81 842 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 SPOPLQ6IQ16 392 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 C8orf74Q6P047 294 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 SLFN11Q7Z7L1 901 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.43□□□□□ -1.38
VPS50-205ENST00000441602 RAET1EQ8TD07 263 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 IPO4Q8TEX9 1081 aaKnown RBP6.43□□□□□ -1.38
VPS50-205ENST00000441602 RUNDC3BQ96NL0 473 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 NUP85Q9BW27 656 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 CELF4Q9BZC1 486 aaKnown RBP6.43□□□□□ -1.38
VPS50-205ENST00000441602 APOBEC3GQ9HC16 384 aaKnown RBP6.43□□□□□ -1.38
VPS50-205ENST00000441602 CREBZFQ9NS37 354 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 CISHQ9NSE2 258 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 PARP2Q9UGN5 583 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 MTUS1Q9ULD2 1270 aa6.43□□□□□ -1.38
VPS50-205ENST00000441602 CCDC66A2RUB6 948 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 MYO1FO00160 1098 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 FANCGO15287 622 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 BUB1BO60566 1050 aaPredicted RBP6.42□□□□□ -1.38
VPS50-205ENST00000441602 ITGB3P05106 788 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 RHOXF2BP0C7M4 288 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 CD58P19256 250 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 MESDQ14696 234 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 SNX17Q15036 470 aa6.42□□□□□ -1.38
VPS50-205ENST00000441602 ODF2Q5BJF6 829 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms