RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 ELMO3Q96BJ8 720 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 LRCH1Q9Y2L9 728 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 WDR91A4D1P6 747 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 RNF8O76064 485 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 POTEJP0CG39 1038 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 HOXA13P31271 388 aaPredicted RBP21.53■■□□□ 1.04
SHOX2-203ENST00000441443 KPNB1Q14974 876 aaKnown RBP21.53■■□□□ 1.04
SHOX2-203ENST00000441443 PLEKHG4Q58EX7 1191 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 IZUMO3Q5VZ72 239 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 FGD4Q96M96 766 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 KIAA1586Q9HCI6 787 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.53■■□□□ 1.04
SHOX2-203ENST00000441443 DMAC2Q9NW81 257 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 CAPN9O14815 690 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 MTA2O94776 668 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 KCNA3P22001 575 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 GCAP28676 217 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 OVGP1Q12889 678 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 PDK4Q16654 411 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 ZFAND2BQ8WV99 257 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 FIZ1Q96SL8 496 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 RBM15Q96T37 977 aaKnown RBP eCLIP21.52■■□□□ 1.04
SHOX2-203ENST00000441443 EPAS1Q99814 870 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 DCLK3Q9C098 648 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 FAM198AQ9UFP1 575 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 MAGEA4P43358 317 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 CACNA2D1P54289 1103 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 ACSBG2Q5FVE4 666 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 ODR4Q5SWX8 454 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 SH3BP5LQ7L8J4 393 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 IFT43Q96FT9 208 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 NOCTQ9UK39 431 aaKnown RBP21.52■■□□□ 1.04
SHOX2-203ENST00000441443 VAV3Q9UKW4 847 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 SUGT1Q9Y2Z0 365 aa21.52■■□□□ 1.04
SHOX2-203ENST00000441443 TRAFD1O14545 582 aaPredicted RBP21.51■■□□□ 1.03
SHOX2-203ENST00000441443 SORBS3O60504 671 aa21.51■■□□□ 1.03
SHOX2-203ENST00000441443 C1orf186Q6ZWK4 172 aa21.51■■□□□ 1.03
SHOX2-203ENST00000441443 CLNKQ7Z7G1 428 aa21.51■■□□□ 1.03
SHOX2-203ENST00000441443 PCMTD2Q9NV79 361 aa21.51■■□□□ 1.03
SHOX2-203ENST00000441443 ADAMTSL1Q8N6G6 1762 aa21.51■■□□□ 1.03
SHOX2-203ENST00000441443 CALCAP01258 141 aa21.51■■□□□ 1.03
SHOX2-203ENST00000441443 LMNAP02545 664 aaKnown RBP21.51■■□□□ 1.03
SHOX2-203ENST00000441443 ZNF365Q70YC5 407 aa21.51■■□□□ 1.03
SHOX2-203ENST00000441443 APLFQ8IW19 511 aaPredicted RBP21.51■■□□□ 1.03
SHOX2-203ENST00000441443 DDX50Q9BQ39 737 aaKnown RBP21.51■■□□□ 1.03
SHOX2-203ENST00000441443 PI4KBQ9UBF8 816 aa21.51■■□□□ 1.03
SHOX2-203ENST00000441443 CFAP69A5D8W1 941 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 CYP1A2P05177 515 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 SKIP12755 728 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 FMO1Q01740 532 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 RFX8Q6ZV50 586 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 PODNQ7Z5L7 613 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 PPM1KQ8N3J5 372 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 CRYGNQ8WXF5 182 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 SMC6Q96SB8 1091 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 GORASP1Q9BQQ3 440 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 PLVAPQ9BX97 442 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 SAYSD1Q9NPB0 183 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 C10orf71Q711Q0 1435 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 A0A1W2PPM1 405 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 F5H6K3 240 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 TBX10O75333 385 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 GH2P01242 217 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 ERFP50548 548 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 CAV1Q03135 178 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 PDCD2Q16342 344 aaPredicted RBP21.5■■□□□ 1.03
SHOX2-203ENST00000441443 HHATQ5VTY9 493 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 ZSWIM2Q8NEG5 633 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 ATL2Q8NHH9 583 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 DYDC2Q96IM9 177 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 ANAPC7Q9UJX3 599 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 CLRN2A0PK11 232 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 H0YIN7 160 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 ZYXQ15942 572 aaKnown RBP21.5■■□□□ 1.03
SHOX2-203ENST00000441443 CTC1Q2NKJ3 1217 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 LRRC74BQ6ZQY2 392 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 GRK7Q8WTQ7 553 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 TLE6Q9H808 572 aa21.5■■□□□ 1.03
SHOX2-203ENST00000441443 PLIN4Q96Q06 1357 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 GZMAP12544 262 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 MUTP22033 750 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 ZNF76P36508 570 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 RASA3Q14644 834 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 FASTKD3Q14CZ7 662 aaKnown RBP21.49■■□□□ 1.03
SHOX2-203ENST00000441443 NFIL3Q16649 462 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 Q4G0T1 1027 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 RFWD2Q8NHY2 731 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 EZH1Q92800 747 aaPredicted RBP21.49■■□□□ 1.03
SHOX2-203ENST00000441443 ARL8BQ9NVJ2 186 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 GTF3C4Q9UKN8 822 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 TCP10L2B9ZVM9 353 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 ABCB5Q2M3G0 1257 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 C2CD6Q53TS8 623 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 SLC45A4Q5BKX6 768 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 SH3TC2Q8TF17 1288 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 ZNF75CPQ92670 426 aaPredicted RBP21.49■■□□□ 1.03
SHOX2-203ENST00000441443 CCDC17Q96LX7 622 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 ZDHHC15Q96MV8 337 aa21.49■■□□□ 1.03
SHOX2-203ENST00000441443 C12orf65Q9H3J6 166 aaKnown RBP21.49■■□□□ 1.03
SHOX2-203ENST00000441443 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms